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A B C D E F G H I K L M N O P Q R S T U V W _

## A

AbstractListValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
AbstractListValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
AbstractQuery - Class in edu.stanford.smi.protegex.queries_tab.toolbox
  Abstract Query define the basic requirement for a Query in a typical search.
AbstractQuery(boolean) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
AbstractQueryListWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
AbstractQueryListWidget(QueriesTab) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
AbstractSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab
AbstractSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Constructor of class AbstractRelationDisplay.
AbstractSlotValueWidget.SlotValueWidgetMouse - Class in edu.stanford.smi.protegex.queries_tab
  Define table mouse adapter.
AbstractSlotValueWidget.SlotValueWidgetMouse() - Constructor for class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget.SlotValueWidgetMouse
AbstractTable - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
AbstractTable(TableModel) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
AbstractTable(TableModel, AbstractTableWidgetCellEditor) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
AbstractTableWidgetCellEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Delegates UI to a specific TableEditorInterface Aggregates a whole bunch of simple editors Chooses the right one based on value type.
AbstractTableWidgetCellEditor(JTable, AbstractTableWidgetState, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
AbstractTableWidgetConfigurationSubPanel - Class in edu.stanford.smi.protegex.widget.abstracttable
  Configuration tab panel
AbstractTableWidgetConfigurationSubPanel(AbstractTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
AbstractTableWidgetState - Class in edu.stanford.smi.protegex.widget.abstracttable
  State consists of three things-- A set of visible slot descriptions An ordering on visible slot descriptions Information on the global editing model of the widget In addition, we have an extensive query API (so that the associated TableModel is fairly simple) Adds information to button related information state (1) is inplace editing supported (2) if so, which cell editors to use For frame there is a choice of two editors (1) combobox containing all matching instances (2) protege dialog
AbstractTableWidgetState(PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
AbstractTableWidgetValue - Class in edu.stanford.smi.protegex.widget.abstracttable
  Value of TableModels used with AbstractTable
AbstractTableWidgetValue() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetValue
AbstractTemplateSlotNumberValidator - Class in edu.stanford.smi.protegex.queries_tab.toolbox
  Description of the class
AbstractTemplateSlotNumberValidator(Cls, Slot) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
AbstractTextPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Class
AbstractTextPanel(String) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
AbstractWidgetConfigurationPanel - Class in edu.stanford.smi.protegex.util
  Base class for configuration panels
AbstractWidgetConfigurationPanel(AbstractWidgetState) - Constructor for class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
AbstractWidgetState - Class in edu.stanford.smi.protegex.util
  Abstract superclass for lots of state objects Wrapper around PropertyList
AbstractWidgetState(PropertyList) - Constructor for class edu.stanford.smi.protegex.util.AbstractWidgetState
Action_AbstractTableListener - Class in edu.stanford.smi.protegex.widget.instancetable
  An action which is enabled if there is a selection and is not enabled otherwise
Action_AbstractTableListener(String, Icon, InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
Action_AddInstance - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_AddInstance(InstanceTableWidget) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_AddInstance
Action_CreateInstance - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_CreateInstance(InstanceTableWidget) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_CreateInstance
Action_CreateUsingPrototype - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_CreateUsingPrototype(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_CreateUsingPrototype
Action_DeleteInstance - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_DeleteInstance(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_DeleteInstance
Action_MoveDown - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_MoveDown(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_MoveDown
Action_MoveUp - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_MoveUp(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_MoveUp
Action_RemoveInstance - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_RemoveInstance(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_RemoveInstance
Action_ViewInstance - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
Action_ViewInstance(InstanceTableWidget, InstanceTable) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.Action_ViewInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.util.SpacerButton
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AddAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_CreateAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_DeleteAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_PrototypeAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_RemoveAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_ViewAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_AddInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_CreateInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_CreateUsingPrototype
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_DeleteInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_MoveDown
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_MoveUp
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_RemoveInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_ViewInstance
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.uri.CheckURIAction
actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.uri.InspectURIAction
actuallyAddWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetBoxLayoutManager
actuallyAddWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetBoxLayoutManager
actuallyAddWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
add(Object) - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
ADD_INSTANCE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
ADD_INSTANCE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
ADD_INSTANCE_DIALOG_TITLE - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
ADD_INSTANCE_DIALOG_TITLE_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
addActionButtonsToComponent(LabeledComponent) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
addActionButtonsToComponent(LabeledComponent) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
addActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
addActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
addActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
addActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
addActions() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
addActions() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
addActions() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
addActions() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
addActions() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
addButton(Action) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
addButton(Action, boolean) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
AddButton - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
AddButton(ScatterboxWidget, ScatterboxTable, ScatterboxTableModel, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.AddButton
addButton(LabeledComponent, Action) - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
addButtons(LabeledComponent) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
addCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
addCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.TableEditorListenerManager
addCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
addEntry(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
addImageMapPanelListener(ImageMapPanelListener) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
addImageMapPanelListener(ImageMapPanelListener) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
addInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
addInstances(Collection) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
addLayoutComponent(String, Component) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
addListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
addMouse() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
addNotify() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
addQuery(Object[], String, String, String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
addQuery(Cls, Slot, Object, Object, String, String, String, String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
addQuery(SearchWidget, InstancesQuery) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
addRectangle(Rectangle, Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
addRow(Object) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
addSelectionObserver(ScatterboxWidgetListener) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
addText(String) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
addUniquely(Collection, Collection) - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
addValue(Instance) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
addValues(Collection) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
addVerticalSpace(int) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
addVerticalSpace(int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
addVisibleSlotDescription(VisibleSlotDescription) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
addWidgetSeparator(WidgetSeparator) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
addWidgetWrapper(int, WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
addWidgetWrapper(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
addWidgetWrapper(int, WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
addWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
addWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
addWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in interface edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessor
addWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessorImpl
addWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
adjustBoxSizeForScrollPane() - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetBoxLayoutManager
adjustBoxSizeForScrollPane() - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetBoxLayoutManager
adjustBoxSizeForScrollPane() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
AlphabeticalComboBoxModel - Class in edu.stanford.smi.protegex.util
  Description of the class
AlphabeticalComboBoxModel() - Constructor for class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
AlphabeticalComboBoxModel(Collection) - Constructor for class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
AlphabeticComparator - Class in edu.stanford.smi.protegex.export.html
AlphabeticComparator() - Constructor for class edu.stanford.smi.protegex.export.html.AlphabeticComparator
announceWrapperActivity(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
announceWrapperActivity(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessorImpl
appendList(List, List) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
ARROW_ARROWHEAD - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
ARROW_DIAMOND - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
ARROW_SIMPLE_LINE_DRAWN - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
ARROW_TRIANGLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
ARROWHEAD_TYPE - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames

## B

BasicOrder - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
BasicOrder(ScatterboxWidget, Slot, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
BasicQueryObject - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
BasicQueryObject() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
BiMap - Class in edu.stanford.smi.protegex.widget.imagemap
  Two directional map.
BiMap() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.BiMap
BiMap(BiMap) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.BiMap
BOOLEAN_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
BooleanEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
BooleanEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
BooleanEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
BooleanSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
BooleanSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Constructor.
BooleanSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Constructor with label, slot, and actions.
BORDER_THICKNESS - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
broadcast() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
broadcastChangeAnnouncement() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
broadcastChangeAnnouncement() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
broadcastStructureChangeAnnouncement() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
BrowserKeyComparator - Class in edu.stanford.smi.protegex.util
  Description of the class
BrowserKeyComparator() - Constructor for class edu.stanford.smi.protegex.util.BrowserKeyComparator
buildAutocreateBeforeEditingCheckBox(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxInPlaceEditingConfigurationPanel
buildAutomaticallyDisplayFormsForCreatedInstances(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxInPlaceEditingConfigurationPanel
buildButtonSelectionPanel(int) - Method in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
buildButtonSelectionPanel(int) - Method in class edu.stanford.smi.protegex.util.SixButtonsConfigurationPanel
buildButtonSelectionPanel(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableButtonsConfigurationPanel
buildComponentGridBagConstraints(int) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
buildComponentGridBagConstraints(int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
buildGUI() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.contains.OverallAppearanceConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.contains.PrototypingAndCreationConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.contains.SummaryConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.instancetable.NewInstanceConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ClassTermPropertiesConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.scatterbox.InstanceTermPropertiesConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.scatterbox.OverallAppearanceConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.scatterbox.PrototypingAndCreationConfigurationPanel
buildGUI() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxInPlaceEditingConfigurationPanel
buildIncludeAbstractClassesInTermListCheckBox(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ClassTermPropertiesConfigurationPanel
buildInPlaceEditingCheckBox(int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
buildRadioButtonForHierarchicalPolicy(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ClassTermPropertiesConfigurationPanel
buildRadioButtonForInstancePolicy(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.InstanceTermPropertiesConfigurationPanel
buildTableComponents() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
buildUseDialogForClasses(int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
buildUseDialogForInstances(int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
ButtonInformationPanel - Class in edu.stanford.smi.protegex.util
  Description of the Class
ButtonInformationPanel(String, boolean, String) - Constructor for class edu.stanford.smi.protegex.util.ButtonInformationPanel
ButtonRelatedWidgetState - Class in edu.stanford.smi.protegex.util
  Maintains state for action buttons Abstract superclass for lots of state objects
ButtonRelatedWidgetState(PropertyList) - Constructor for class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState

## C

callLogicalClick(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
callLogicalDrag(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
callLogicalDragFinished(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
callLogicalDragStarted(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
callLogicalPress(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
callLogicalRelease(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
cancelButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
cancelCellEditing() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
cancelCellEditing() - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
changed(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
changeRectangleColor(Rectangle, Color, Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
checkAllFacetsButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
checkAllSlotsButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
checkClsTaxonomicStructure(Cls) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
CheckListCellRenderer - Class in edu.stanford.smi.protegex.export.html
CheckListCellRenderer() - Constructor for class edu.stanford.smi.protegex.export.html.CheckListCellRenderer
CheckListener - Class in edu.stanford.smi.protegex.export.html
CheckListener(JList) - Constructor for class edu.stanford.smi.protegex.export.html.CheckListener
CheckURIAction - Class in edu.stanford.smi.protegex.widget.uri
  Description of the class
CheckURIAction(String) - Constructor for class edu.stanford.smi.protegex.widget.uri.CheckURIAction
checkValidity(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
checkValidity(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
CHOOSE - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
ChooseLinkDialog - Class in edu.stanford.smi.protegex.widget.graph
ChooseLinkDialog() - Constructor for class edu.stanford.smi.protegex.widget.graph.ChooseLinkDialog
ChooseLinkDialog(Frame, String, boolean, Slot, ArrayList) - Constructor for class edu.stanford.smi.protegex.widget.graph.ChooseLinkDialog
ChooseRelationDialog - Class in edu.stanford.smi.protegex.widget.graph
ChooseRelationDialog() - Constructor for class edu.stanford.smi.protegex.widget.graph.ChooseRelationDialog
ChooseRelationDialog(Frame, String, boolean, ArrayList) - Constructor for class edu.stanford.smi.protegex.widget.graph.ChooseRelationDialog
CLASS_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
ClassEditor_PullDownMenu - Class in edu.stanford.smi.protegex.widget.abstracttable
  Flattens subclasses to a list for a combo box
ClassEditor_PullDownMenu(JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_PullDownMenu
ClassEditor_PullDownMenu(JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_PullDownMenu
ClassEditor_UseDialog - Class in edu.stanford.smi.protegex.widget.abstracttable
  Pops up the Protege dialog
ClassEditor_UseDialog(String, JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_UseDialog
ClassEditor_UseDialog(String, JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_UseDialog
ClassSelectWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
ClassSelectWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Constructor.
ClassSelectWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Constructor with label, slot, and actions.
ClassTermPropertiesConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ClassTermPropertiesConfigurationPanel(ScatterboxWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ClassTermPropertiesConfigurationPanel
cleanQuery() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
clear() - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
clearAllFacetsButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
clearAllSlotsButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
clearList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
clearList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
clearQueryStack() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
clearSearch() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
clearSearch() - Method in class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
clearSearch() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
clearSearchObjectContent(String) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
clearSelection() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
clearSelection() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
clearSelection() - Method in class edu.stanford.smi.protegex.widget.imagemap.KAPanel
clearWidgetSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
clone() - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
Cls_Filling - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
Cls_Filling(ScatterboxWidget, Slot, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.Cls_Filling
ClsComparator - Class in edu.stanford.smi.protegex.widget.graph
ClsComparator() - Constructor for class edu.stanford.smi.protegex.widget.graph.ClsComparator
ClsSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
ClsSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Constructor.
ClsSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Constructor with label, slot, and actions.
color - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetValue
color - Variable in class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
ColorIcon - Class in edu.stanford.smi.protegex.widget.graph
ColorIcon() - Constructor for class edu.stanford.smi.protegex.widget.graph.ColorIcon
ColorIcon(Color, int, int) - Constructor for class edu.stanford.smi.protegex.widget.graph.ColorIcon
ColorPanel - Class in edu.stanford.smi.protegex.util
  Displays a Color used by ColorWell
ColorPanel(Color) - Constructor for class edu.stanford.smi.protegex.util.ColorPanel
ColorPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Displays a Color used by ColorWell
ColorPanel(Color) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ColorPanel
ColorWell - Class in edu.stanford.smi.protegex.util
  Actually has the actual ColorPanel and a JButton.
ColorWell(Color, ActionListener) - Constructor for class edu.stanford.smi.protegex.util.ColorWell
ColorWell(Color, ActionListener, String) - Constructor for class edu.stanford.smi.protegex.util.ColorWell
ColorWell(Color, ActionListener, String, boolean) - Constructor for class edu.stanford.smi.protegex.util.ColorWell
ColorWell(Color, ActionListener, boolean) - Constructor for class edu.stanford.smi.protegex.util.ColorWell
ColumnConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Visible slot descriptions
ColumnConfigurationPanel(InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.ColumnConfigurationPanel
columnName - Variable in class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
columnSelectionChanged(ListSelectionEvent) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
ComboBoxColorEditor - Class in edu.stanford.smi.protegex.widget.graph
ComboBoxColorEditor() - Constructor for class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
ComboBoxColorRenderer - Class in edu.stanford.smi.protegex.widget.graph
ComboBoxColorRenderer() - Constructor for class edu.stanford.smi.protegex.widget.graph.ComboBoxColorRenderer
ComboBoxEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
ComboBoxEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
ComboBoxEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
compare(Object, Object) - Method in class edu.stanford.smi.protegex.export.html.AlphabeticComparator
compare(Object, Object) - Method in class edu.stanford.smi.protegex.util.BrowserKeyComparator
compare(Object, Object) - Method in class edu.stanford.smi.protegex.widget.graph.ClsComparator
compare(Object, Object) - Method in class edu.stanford.smi.protegex.widget.graph.GraphObjectComparator
compareMatchStatus(InstancesQuery, boolean) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareMatchStatus(boolean, boolean) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareName(InstancesQuery, String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareName(String, String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareObject(Object, Object, String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareQueries() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
compareQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
  Compare the current loading query with another query.
compareQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
  Compare the current loading query with another query.
compareSearchWidget(Object[], Object[]) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareSearchWidgets(InstancesQuery, Vector) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
compareSearchWidgets(Vector, Vector) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
ComplexLink - Class in edu.stanford.smi.protegex.widget.graph
ComplexLink() - Constructor for class edu.stanford.smi.protegex.widget.graph.ComplexLink
ComplexLink(JGoPort, JGoPort) - Constructor for class edu.stanford.smi.protegex.widget.graph.ComplexLink
ComplexLinkLabel - Class in edu.stanford.smi.protegex.widget.graph
ComplexLinkLabel() - Constructor for class edu.stanford.smi.protegex.widget.graph.ComplexLinkLabel
computeLinks(Element) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
  This method corrects or creates a url contained in an Element as an hyperlink.
concatenateWithoutDuplicates(Collection) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
configNamesComboBox_itemStateChanged(ItemEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
configNamesEditor_keyReleased(KeyEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
ConfigTable - Class in edu.stanford.smi.protegex.widget.instancetable
  Table used in configuration panel to get column width, color, name
ConfigTable(InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.ConfigTable
ConfigTableEditor - Class in edu.stanford.smi.protegex.widget.instancetable
  This is not a subtle object.
ConfigTableEditor(JTable, InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
ConfigTableModel - Class in edu.stanford.smi.protegex.widget.instancetable
  Basically an adapter-- takes the state and makes it palatable to a Table.
ConfigTableModel(InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
ConfigTableRenderer - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
ConfigTableRenderer() - Constructor for class edu.stanford.smi.protegex.widget.instancetable.ConfigTableRenderer
configureComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
configureComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_PullDownMenu
configureComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_UseDialog
configureEnclosingScrollPane() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
configureUIFromKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
configureUIFromKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
configureUIFromKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
configureUIFromKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
CONNECTOR_ARROWHEAD_TYPE - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
CONNECTOR_DISPLAY_TEXT - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
CONNECTOR_LINE_TYPE - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
CONNECTOR_SLOT - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
Constants - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
constraints - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
ConstraintsModel - Class in edu.stanford.smi.protegex.queries_tab
ConstraintsModel() - Constructor for class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
ContainsWidget - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
ContainsWidget() - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget
ContainsWidget(Class) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget
ContainsWidget_AbstractAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
ContainsWidget_AbstractAction(ContainsWidget, String, Icon) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
ContainsWidget_AddAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_AddAction(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AddAction
ContainsWidget_CreateAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_CreateAction(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_CreateAction
ContainsWidget_CreateAction(ContainsWidget, String, Icon) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_CreateAction
ContainsWidget_DeleteAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_DeleteAction(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_DeleteAction
ContainsWidget_PrototypeAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_PrototypeAction(ContainsWidget, int) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_PrototypeAction
ContainsWidget_RemoveAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_RemoveAction(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_RemoveAction
ContainsWidget_ViewAction - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidget_ViewAction(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidget_ViewAction
ContainsWidgetConfigurationPanel - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
ContainsWidgetConfigurationPanel(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidgetConfigurationPanel
ContainsWidgetListener - Interface in edu.stanford.smi.protegex.widget.contains
  Description of the Interface
containsWidgetSelectionChanged() - Method in interface edu.stanford.smi.protegex.widget.contains.ContainsWidgetListener
ContainsWidgetState - Class in edu.stanford.smi.protegex.widget.contains
ContainsWidgetState(PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
convertString(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.FloatEditor
convertString(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.IntegerEditor
convertString(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.StringEditor
convertString(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
convertToNumber(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatTemplateSlotValidator
convertToNumber(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerTemplateSlotValidator
CoordinateTransform - Class in edu.stanford.smi.protegex.widget.imagemap
  Takes two rectangles, does the calculations both forwards and back.
CoordinateTransform(Rectangle, Rectangle) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
copyChildren(JGoArea, JGoCopyEnvironment) - Method in class edu.stanford.smi.protegex.widget.graph.Node
copyObject(JGoCopyEnvironment) - Method in class edu.stanford.smi.protegex.widget.graph.Node
copyQuery(InstancesQuery, InstancesQuery) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
copyVec(Vector, Vector) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
  Deep copy the Vector.
correctLink(Element) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
  The method corrects the url inside an Element, that is supposed to be an element containing a link only.
CREATE_INSTANCE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
CREATE_INSTANCE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
CREATE_INSTANCE_DIALOG_TITLE - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
CREATE_INSTANCE_DIALOG_TITLE_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
createActions() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
CreateButton - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
CreateButton(ScatterboxWidget, ScatterboxTable, ScatterboxTableModel, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.CreateButton
createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
createCheckBox(String, int) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
createCheckBox(String, int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
createComplexLink(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
createComponents(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
  Create components in this relation display.
createComponents(String, QueryListModel) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
  Create components in this relation display.
createDrawable(String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
createEditorPane() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
createEditorPane() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
createEditorPaneLinkDetector() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
createEditorPaneLinkDetector(boolean, boolean) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
createEntry(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
createEntry(int, int, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
createGraphView(GraphWidget) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
createILAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
createLabel(String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
createLink(Element) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
  The method check if the element contains a url in plain text, and if so, it creates the html tag HTML.Tag.A to have the url displayed as an hyperlink.
createList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
createList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
createList(QueryListModel) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
createList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
createListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
createListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Create components in this relation display.
createListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Create components in this relation display.
createListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Create components in this relation display.
createListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Create components in this relation display.
createNames(InstancesQuery, int) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
createObjs(InstancesQuery, int) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
createQueryDialogPanel(InstancesQuery, QueriesTab) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
createShowAllInstancesAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
createTextComponent() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
createTextComponent() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
createTextfield(String, int) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
createTextField() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
createUI(EditorPaneLinkDetector) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
currentValue - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget

## D

DASH_DOT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
DASH_DOT_DOT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
DASHED - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
DEFAULT_COLOR - Static variable in class edu.stanford.smi.protegex.widget.imagemap.LineView
DEFAULT_DIALOG_TITLE_FOR_SELECTING_CLASSES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
DEFAULT_DIALOG_TITLE_FOR_SELECTING_INSTANCES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
DEFAULT_HORIZONTAL_SCROLL_INCREMENT - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
DEFAULT_SEPARATION_DISTANCE - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
DEFAULT_USE_SEPARATORS - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
DEFAULT_VERTICAL_SCROLL_INCREMENT - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
DELETE_INSTANCE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DELETE_INSTANCE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
deleteButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
deleteContents() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
deleteHighlightedRectangle() - Method in class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
deleteRow(int) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
DIALOG_TITLE_FOR_SELECTING_CLASSES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
DIALOG_TITLE_FOR_SELECTING_INSTANCES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
DIAMOND - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
DIRECT_INSTANCES_ONLY - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
display(Rectangle, Color, String) - Method in class edu.stanford.smi.protegex.widget.imagemap.KAPanel
DISPLAY_ADD_INSTANCE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_CREATE_INSTANCE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_DELETE_INSTANCE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_MOVE_INSTANCE_BUTTONS - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_PROTOTYPE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_REMOVE_INSTANCE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
DISPLAY_VIEW_INSTANCE_BUTTON - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
displayRect(Rectangle, Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.KAPanel
displayRectangle(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
displaySymbol(String) - Method in class edu.stanford.smi.protegex.widget.imagemap.KAPanel
dispose() - Method in class edu.stanford.smi.protegex.export.html.HTMLExportPlugin
dispose() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
dispose() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
dispose() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
dispose() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
dispose() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.NumberOfSlotValuesComponent
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.SummaryPanel
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
dispose() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperPool
dispose() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
dispose() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
dispose() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
dispose() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
dispose() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
dispose() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
dispose() - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
dispose() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
doBackgroundClick(int, Point, Point) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
doEndEdit() - Method in class edu.stanford.smi.protegex.widget.graph.ComplexLinkLabel
doEndEdit() - Method in class edu.stanford.smi.protegex.widget.graph.NodeLabel
DOMAIN_VALUE_SLOT - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairConstants
DOMAIN_VALUE_SLOTS - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
DomainRangeObjectPairConstants - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
DomainRangeObjectPairEntry - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
DomainRangeObjectPairEntry() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
DomainRangeObjectPairEntryScatterboxConfigurationChecks - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
DomainRangeObjectPairEntryScatterboxConfigurationChecks() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntryScatterboxConfigurationChecks
DomainRangeObjectPairEntryScatterboxWidget - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
DomainRangeObjectPairEntryScatterboxWidget() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntryScatterboxWidget
doMouseDblClick(int, Point, Point) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
doMouseUp(int, Point, Point) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
doStartEdit(JGoView, Point) - Method in class edu.stanford.smi.protegex.widget.graph.ComplexLinkLabel
doStartEdit(JGoView, Point) - Method in class edu.stanford.smi.protegex.widget.graph.NodeLabel
doTask(String) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  flexible task
doTask(String) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Allow any other flexible process
DOTTED - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
doUpLoad(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
downLoadQuery() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
downLoadQuery() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
  This is used to download the current available Query.
dragDropEnd(DragSourceDropEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
dragEnter(DragSourceDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
dragEnter(DropTargetDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
dragExit(DragSourceEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
dragExit(DropTargetEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
dragGestureRecognized(DragGestureEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragGestureListener
dragOver(DragSourceDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
dragOver(DropTargetDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
drop(DropTargetDropEvent) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
drop(DropTargetDropEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
dropActionChanged(DragSourceDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
dropActionChanged(DropTargetDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener

## E

EDIT - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
EditableComboBoxModel - Class in edu.stanford.smi.protegex.util
  Description of the class
EditableComboBoxModel() - Constructor for class edu.stanford.smi.protegex.util.EditableComboBoxModel
EditableComboBoxModel(Collection) - Constructor for class edu.stanford.smi.protegex.util.EditableComboBoxModel
editCellAt(int, int, EventObject) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
EditorPaneComponent - Class in edu.stanford.smi.protegex.widget.editorpane
EditorPaneComponent() - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
EditorPaneLinkDetector - Class in edu.stanford.smi.protegex.widget.editorpane
  Utility class for detecting hyperlinks and internal ontology links in a text.
EditorPaneLinkDetector() - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
EditorPaneLinkDetector(boolean, boolean) - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
EditorPaneLinkDetector.HTMLDocLinkDetector - Class in edu.stanford.smi.protegex.widget.editorpane
EditorPaneLinkDetector.HTMLDocLinkDetector(StyleSheet) - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
EditorPanePlainWidget - Class in edu.stanford.smi.protegex.widget.editorpane
  Slot widget for detecting hyperlinks in entered text and opening the link in a new browser when it is clicked.
EditorPanePlainWidget() - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
EditorPaneWidget - Class in edu.stanford.smi.protegex.widget.editorpane
  Slot widget for detecting hyperlinks in entered text and opening the link in a new browser when it is clicked.
EditorPaneWidget() - Constructor for class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
edu.stanford.smi.protegex.export.html - package edu.stanford.smi.protegex.export.html
edu.stanford.smi.protegex.queries_tab - package edu.stanford.smi.protegex.queries_tab
edu.stanford.smi.protegex.queries_tab.toolbox - package edu.stanford.smi.protegex.queries_tab.toolbox
edu.stanford.smi.protegex.util - package edu.stanford.smi.protegex.util
edu.stanford.smi.protegex.widget.abstracttable - package edu.stanford.smi.protegex.widget.abstracttable
edu.stanford.smi.protegex.widget.contains - package edu.stanford.smi.protegex.widget.contains
edu.stanford.smi.protegex.widget.editorpane - package edu.stanford.smi.protegex.widget.editorpane
edu.stanford.smi.protegex.widget.graph - package edu.stanford.smi.protegex.widget.graph
edu.stanford.smi.protegex.widget.imagemap - package edu.stanford.smi.protegex.widget.imagemap
edu.stanford.smi.protegex.widget.instancetable - package edu.stanford.smi.protegex.widget.instancetable
edu.stanford.smi.protegex.widget.scatterbox - package edu.stanford.smi.protegex.widget.scatterbox
edu.stanford.smi.protegex.widget.slider - package edu.stanford.smi.protegex.widget.slider
edu.stanford.smi.protegex.widget.uri - package edu.stanford.smi.protegex.widget.uri
ELLIPSE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
enableQueryButton(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
enableQueryButton(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
enableQueryButtons(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
enableSearch() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
ENTRY_CLASS - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairConstants
ENTRY_CLASS - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryConstants
ENTRY_METACLASS_NAME - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
ENTRY_SLOT_NAME - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
equals(Object) - Method in class edu.stanford.smi.protegex.widget.graph.ClsComparator
equals(Object) - Method in class edu.stanford.smi.protegex.widget.graph.GraphObjectComparator
equals(Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
export() - Method in class edu.stanford.smi.protegex.export.html.HTMLExport
ExportConfiguration - Class in edu.stanford.smi.protegex.export.html
ExportConfiguration() - Constructor for class edu.stanford.smi.protegex.export.html.ExportConfiguration
ExtendedButtonInformationPanel - Class in edu.stanford.smi.protegex.util
  Panel for buttons which can pop up a dialog
ExtendedButtonInformationPanel(String, boolean, String, String) - Constructor for class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel

## F

FIELDHEIGHT - Static variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
FIELDWIDTH - Static variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
fillObjectWithIndexedValue(Instance, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
fillObjectWithIndexedValue(Instance, int) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
fireActionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
fireContentsChanged() - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
fireEditingCanceled() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TableEditorListenerManager
fireEditingStopped() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TableEditorListenerManager
FLOAT_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
FloatEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
FloatEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FloatEditor
FloatEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FloatEditor
FloatSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
FloatSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Constructor.
FloatSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Constructor with label, slot, and actions.
FloatTemplateSlotValidator - Class in edu.stanford.smi.protegex.queries_tab.toolbox
  Description of the class
FloatTemplateSlotValidator(Cls, Slot) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.FloatTemplateSlotValidator
flowWidgets() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
FORMAT_ERROR - Static variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
FormDescription - Class in edu.stanford.smi.protegex.widget.contains
  Not available from UI
FormDescription(Instance) - Constructor for class edu.stanford.smi.protegex.widget.contains.FormDescription
FourButtonsConfigurationPanel - Class in edu.stanford.smi.protegex.util
  Panel for five buttons.
FourButtonsConfigurationPanel(ButtonRelatedWidgetState) - Constructor for class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
FrameData - Class in edu.stanford.smi.protegex.export.html
FrameData(String, boolean) - Constructor for class edu.stanford.smi.protegex.export.html.FrameData
FrameEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
FrameEditor(JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
FrameEditor(JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
FrameEditor_PullDownMenu - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
FrameEditor_PullDownMenu(JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_PullDownMenu
FrameEditor_PullDownMenu(JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_PullDownMenu
FrameEditor_UseDialog - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
FrameEditor_UseDialog(JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_UseDialog
FrameEditor_UseDialog(JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_UseDialog
FrameRenderer_ListCell - Class in edu.stanford.smi.protegex.util
  Description of the class
FrameRenderer_ListCell() - Constructor for class edu.stanford.smi.protegex.util.FrameRenderer_ListCell
FROM_SLOT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
FUNCTION_NAME - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants

## G

GenericTableCellRenderer - Class in edu.stanford.smi.protegex.widget.abstracttable
  Renderer for everything Note: it uses AbstractTableWidgetValue, but only really uses the color and value slots.
GenericTableCellRenderer(boolean) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.GenericTableCellRenderer
geometryChange(Rectangle) - Method in class edu.stanford.smi.protegex.widget.graph.Node
geometryChangeChild(JGoObject, Rectangle) - Method in class edu.stanford.smi.protegex.widget.graph.Node
getAddInstanceButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getAddInstanceDialogTitle() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getAddInternalLinkActionListener() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getAddStyle() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getAllFrames() - Method in class edu.stanford.smi.protegex.util.PagedFrameList
getAllowedClasses() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
getAllowedClasses() - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_CreateInstance
getAllowedClses() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
getAllRectangles() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getArrowheadType() - Method in class edu.stanford.smi.protegex.widget.graph.GraphObjectProperties
getArrowheadType() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getArrowheadType() - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
getAssociatedImage() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getBoldAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getBooleanConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getBooleanProperty(String, Boolean) - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getBrush() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getCellEditorValue() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
getCellEditorValue() - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
getCheckIcon() - Static method in class edu.stanford.smi.protegex.widget.uri.Icons
getCheckStatus(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getCls() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  return the specified cls in this searchWidget.
getCls(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getCls() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
getCls() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getClsConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getClsName(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getClsName() - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getClsName() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getColor() - Method in class edu.stanford.smi.protegex.util.ColorWell
getColor() - Method in class edu.stanford.smi.protegex.widget.graph.ColorIcon
getColumnClass(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getColumnCount() - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
getColumnCount() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getColumnCount() - Method in class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel
getColumnCount() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
getColumnName(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
getColumnName(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getColumnName(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel
getColumnName(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
getComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
getComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
getComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
getComboBoxModel() - Method in class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
getComboModel() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  get the combobox model.
getComponent() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Return the JComponent to show on screen.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Return the relation display component.
getComponent() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Return the relation display component.
getConnectorSlot() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
getConnectorSlot() - Method in class edu.stanford.smi.protegex.widget.graph.Node
  Convenience method for returning the connector slot as a Slot object.
getConnectorSlot() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getConstraint() - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
getCreateInstanceButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getCreateInstanceDialogTitle() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getCSSPath() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getCurrentlyDraggingOverColumn() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getCurrentlyDraggingOverRow() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getCustomDisplayName() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getCustomWrapWidth() - Method in class edu.stanford.smi.protegex.widget.graph.NodeLabel
getData() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Return an array of Objects that are shown in the widget.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Get the data from the text area and return it as a string array.
getData() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Get the data from the text area and return it as a string array.
getDeleteInstanceButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getDescriptionForIndex(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getDescriptionForSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getDescriptiveSentence() - Method in class edu.stanford.smi.protegex.widget.contains.FormDescription
getDetailedWarnings(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
getDetailedWarnings(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
getDialogTitle() - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
getDialogTitle() - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
getDialogTitleForSelectingClasses() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
getDialogTitleForSelectingInstances() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
getDisplayedSlotName() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getDocument() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
getDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getDomainObject(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getDomainSlots() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getDomainType(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getDomainType(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getDomainTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getDomainTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getDomainTypeFromEntryCls(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getDomainTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getDomainValueSlots(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getDomainValueSlots(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getDrawable() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getEditorComponent() - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
getEditorPane() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
getEditorPane() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
getEditorPaneHelpAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getEditorPaneMouseListener() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
getEditorPaneMouseMotionListener() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
getElementAt(int) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getElementAt(int) - Method in class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
getElementAt(int) - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
getEmptyBox() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getEnabled() - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
getEnabled() - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
getEntries() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getEntriesSlot(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getEntriesSlot(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getEntryCls(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getErrorMessage(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
getErrorMessage() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
getErrorMessage() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatTemplateSlotValidator
getErrorMessage() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerTemplateSlotValidator
getExportConfiguration() - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
getFacetsToDisplay() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getFirstPart(String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
  Get the first Element of earch line.
getFloatConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getFooterPath() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getFrameListener() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getGridStyle() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
getGridStyleInt() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
getHeaderPath() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getHierarchicalPolicyWhenClassesAreDomainIndices() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getHighligherAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getHighlightAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getHorizontalAxisLabel() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getHorizontalOrder() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getHorizontalSlot() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getHTMLHighlightAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getIconHeight() - Method in class edu.stanford.smi.protegex.widget.graph.ColorIcon
getIconWidth() - Method in class edu.stanford.smi.protegex.widget.graph.ColorIcon
getImage() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
getImage() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
getImageLocation() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getIndex(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getIndexForEntry(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getIndexForEntry(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getIndexForValue(Object) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getIndexForValue(Object) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getInsertImageAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getInspectIcon() - Static method in class edu.stanford.smi.protegex.widget.uri.Icons
getInstance() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
getInstance() - Method in class edu.stanford.smi.protegex.widget.graph.ComplexLink
getInstance() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getInstanceAt(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getInstanceConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getInstances(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getInstances(Cls, int, Slot) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getIntegerConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getIntProperty(String, Integer) - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getItalicsAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getItem() - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
getKB() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get the reference of current knowledge base in protege.
getKB() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getKB() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getKBQueryUtils() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getKeysForValue(Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
getLabel() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get the label of RelationDisplay.
getLabel() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Return the label of the widget.
getLabel() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getLabeledComponent() - Method in class edu.stanford.smi.protegex.queries_tab.InstancesList
getLine(String) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
  Organizer the query in a vector of string by line.
getLineColor() - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
getLineThickness() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getLineThicknessMaximum() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getLineThicknessMinimum() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getLineType() - Method in class edu.stanford.smi.protegex.widget.graph.GraphObjectProperties
getLineType() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getLineType() - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
getLinkActive() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector
getLinkPointFromPoint(int, int, Point) - Method in class edu.stanford.smi.protegex.widget.graph.NodePort
  Return a point on the edge of the drawable rather than a point on the port itself.
getLinkType() - Method in class edu.stanford.smi.protegex.widget.graph.ChooseLinkDialog
getList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class edu.stanford.smi.protegex.export.html.CheckListCellRenderer
getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class edu.stanford.smi.protegex.util.FrameRenderer_ListCell
getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorRenderer
getLogicalCoordinateSystem() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getMainComponent() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getMatchAll() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getMatchSlotWidget(String) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getMaximum() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
getMinimum() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
getModel() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getModel() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
getMoveInstanceDownTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getMoveInstanceTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getMoveInstanceUpTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getName() - Method in class edu.stanford.smi.protegex.export.html.FrameData
getName() - Method in class edu.stanford.smi.protegex.export.html.HTMLExportPlugin
getName() - Method in class edu.stanford.smi.protegex.queries_tab.QueryRecord
getName() - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
getName() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getName() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
getName() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
getName() - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getName() - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getNames(String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
getNode() - Method in class edu.stanford.smi.protegex.widget.graph.NodePort
  Convenience method for returning the parent as a Node.
getNodeRectangle(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getNorthComponent() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get the component which will locate in the north of relation display.
getNumberOfWidgetWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
getObject(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getObjectName(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getOperation(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getOrCreateDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getOrCreateDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getOrCreateDomainObject(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getOrCreateDomainObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getOrCreateRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getOrCreateRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getOrCreateRangeObject(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getOrCreateRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getOutputDir() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getOwner() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getPageSize() - Method in class edu.stanford.smi.protegex.util.PagedFrameList
getPanel() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
getPen() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getPolicyWhenInstancesAreDomainIndices() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getPoolForClass(Cls, Class, int, int) - Static method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperPool
getPort() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getPosition(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getPosition() - Method in class edu.stanford.smi.protegex.queries_tab.QueryRecord
getPositionInfo(Instance, Slot) - Static method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getPositionInfo(Instance, Slot, Instance) - Static method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
  Provides access to position information for either:
  a) nodes
  b) elbows in connectors (only works for connectors that have instances associated with them -- i.e.
getPossibleChoices() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_PullDownMenu
getPossibleChoices() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
getPossibleChoices() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_PullDownMenu
getPossibleChoices() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_UseDialog
getPossibleChoices() - Method in class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_PullDownMenu
getPreferredSize() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
getPreferredSize() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
getPreferredSize() - Method in class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
getPrefix() - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getProject() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getProject() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get Protege project
getProjectName() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getProperties() - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
getPropertyList() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
getPropertyList() - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getPrototypeButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getPrototypeDepth() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getQueries() - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getQueriesTab() - Static method in class edu.stanford.smi.protegex.util.LocalizedText
getQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getQueryAt(int) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getQueryName() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getQueryName() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getQueryStack() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getQueryUtilsObject() - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntryScatterboxWidget
getQueryUtilsObject() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getQueryUtilsObject() - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryScatterboxWidget
getQueryWithName(String) - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getRangeObject(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeObject(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getRangeSlot() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getRangeType(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeType(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
getRangeTypeFromEntryCls(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeTypeFromEntryCls(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
getRangeValueSlot(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeValueSlot(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeValueSlot(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeValueSlot(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeValueSlots(Cls) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeValueSlots(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
getRangeValueSlots(Cls) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRangeValueSlots(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
getRectangleForSymbol(String) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getRelation() - Method in class edu.stanford.smi.protegex.widget.graph.ChooseRelationDialog
getRemainingSlots() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getRemoveInstanceButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getResult() - Method in class edu.stanford.smi.protegex.queries_tab.MatchInstances
getRootClasses() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getRowCount() - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
getRowCount() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getRowCount() - Method in class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel
getRowCount() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
getRowForInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
getRowForInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getSearchClass() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getSearchConstraint() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getSearchObject() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getSearchPanel() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getSearchSubject() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getSecondPart(String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
  Get the second Element of earch line.
getSelectableList() - Method in class edu.stanford.smi.protegex.util.PagedFrameList
getSelectedEntry() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getSelectedInstance() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
getSelectedInstances() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
getSelectedItem() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItem() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItem() - Method in class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
getSelectedItem() - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get the selected items.
getSelectedItems() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Returns the items currently selected in the JComponent.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Get the selected string in text area and return them as a string array.
getSelectedItems() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Get the selected string in text area and return them as a string array.
getSelectedObject() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Return the selected Object.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Get the selected object which is a string for symbol slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Get the selected object which is a class for class slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Get the selected object which is a cls for class slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Get the selected object which is a string for float slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Get the selected object which is an instance for instance slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Get the selected object which is a string for integer slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Get the selected object which is a slot for slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Get the selected object which is a string for symbol slot.
getSelectedObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Get the selected object which is a string for symbol slot.
getSelectedObjects() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Get the selected Objects for the Query.
getSelection() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SelectPanel
getSelection() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
getSelection() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
getSelectionColor() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getSelectSlotName() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getShape() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getShapeColor() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getShortWarning(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
getShortWarning(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
getShowInstances() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getShowSelectedRectanglesDuringKA() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getShowTooltips() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getSize() - Method in class edu.stanford.smi.protegex.queries_tab.QueryListModel
getSize() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getSize() - Method in class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
getSize() - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
getSize() - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getSize() - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getSlot(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getSlot() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Get slot return the current slot.
getSlot() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Get slot return the current slot.
getSlot() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Get slot return the current slot.
getSlot() - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getSlot() - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getSlotName() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Get the name of the slot for this relation display.
getSlotName() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Every widget is used to represent the value of s specific slot.
getSlotName(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
getSlotName() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
getSlotNames() - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
getSlots() - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
getSlotsModel() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getSlotsToDisplay() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getSlotType() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  return type for the selected subject
getSlotType(Slot) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
getSlotTypes() - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
getSlotVisibilityDescriptions() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getSnapOnMove() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
getSnapOnMoveInt() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
getSortSubclasses() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getSourceTable() - Method in class edu.stanford.smi.protegex.widget.scatterbox.TransferableCell
getSpaceBetweenSubwidgets() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
getSpacerSize() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
getSpacerSize() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
getSpecifiedString(String, String) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
  This function is used to get the content of Concept Name: UI:, Query Term:, and Semantic type:
getState() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
getState() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
getState() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
getState() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getStrikeThroughAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getStringConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getStringProperty(String, String) - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
getSymbolConstraints() - Static method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getSymbolForRectangle(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getSymbols() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
getTab() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
getTab() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getTab() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Get the tab.
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
  value must be an AbstractTableWidgetValue
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableCellEditor
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.GenericTableCellRenderer
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.graph.TableColorRenderer
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableRenderer
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableCellRenderer
getTableLocationForEvent(DragGestureEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
getTableLocationForEvent(DropTargetDragEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
getTableLocationForEvent(DropTargetDropEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
getTargetValue() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getText() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryNamePanel
getText() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getTextColor() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
getTextField() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
getTickIncrement() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
getTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
getTooltip() - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
getTooltipColor() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
getTotalNumberOfVisibleSlots() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getTransferData(DataFlavor) - Method in class edu.stanford.smi.protegex.widget.scatterbox.TransferableCell
getTransferDataFlavors() - Method in class edu.stanford.smi.protegex.widget.scatterbox.TransferableCell
getType() - Method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
getType() - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
getType() - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
getUnderlineAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getUnderlyingTable() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getUnhighlightAction() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
getUniqueName() - Method in class edu.stanford.smi.protegex.widget.graph.Node
getUseDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
getUseHierarchicalFolders() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getUseNumbering() - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
getUserInterface() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
getUseSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
getUseSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
getValidator() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
getValidator() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
getValidRelations() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
getValue() - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
getValue() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
getValue() - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
getValue() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
getValueAt(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
getValueAt(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
getValueAt(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel
getValueAt(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
getValueForEntry(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getValueForEntry(Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getValueForIndex(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getValueForIndex(int) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
getValueFromDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ClassEditor_UseDialog
getValueFromDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
getValueFromDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_PullDownMenu
getValueFromDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor_UseDialog
getValueFromDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_UseDialog
getValues() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotModel
getValues() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.Cls_Filling
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.Instance_Filling
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.Integer_Filling
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.scatterbox.Symbol_Filling
getValues() - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
getValues() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
getValueWidgets(int) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
getVerticalAxisLabel() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getVerticalOrder() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
getVerticalSlot() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getView() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
getViewInstanceButtonTooltip() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
getVisibleSlots() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
getWidget() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Return the JComponent to hold the data.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
  Return the embedded widget in the Query List
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Return the embedded widget in the relation display, the JTextArea.
getWidget() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
getWidgetBox(int, boolean) - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetWrapperHolder
getWidgetBox(int, boolean) - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetWrapperHolder
getWidgetBox(int, boolean) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
getWidgetHeight() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getWidgets() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getWidgetSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
getWidgetWidth() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
getWidgetWrapperForInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperPool
getWidgetWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
getXInt() - Method in class edu.stanford.smi.protegex.widget.graph.GraphPoint
getYInt() - Method in class edu.stanford.smi.protegex.widget.graph.GraphPoint
goodDomainSpecification(KBQueryUtils, Cls) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
goodRangeSpecification(KBQueryUtils, Cls) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
GraphConfigurationPanel - Class in edu.stanford.smi.protegex.widget.graph
GraphConfigurationPanel(GraphWidget) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphConfigurationPanel
GraphDocument - Class in edu.stanford.smi.protegex.widget.graph
GraphDocument(GraphWidget) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphDocument
GraphObjectComparator - Class in edu.stanford.smi.protegex.widget.graph
GraphObjectComparator() - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphObjectComparator
GraphObjectProperties - Class in edu.stanford.smi.protegex.widget.graph
GraphObjectProperties(String, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphObjectProperties
GraphPalette - Class in edu.stanford.smi.protegex.widget.graph
GraphPalette() - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphPalette
GraphPoint - Class in edu.stanford.smi.protegex.widget.graph
GraphPoint(String) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphPoint
GraphProperties - Class in edu.stanford.smi.protegex.widget.graph
GraphProperties(String, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphProperties
GraphTypes - Interface in edu.stanford.smi.protegex.widget.graph
GraphView - Class in edu.stanford.smi.protegex.widget.graph
GraphView(GraphWidget) - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphView
GraphWidget - Class in edu.stanford.smi.protegex.widget.graph
GraphWidget() - Constructor for class edu.stanford.smi.protegex.widget.graph.GraphWidget
GRID_CROSSES - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_DOTS - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_INVISIBLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_LINES - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_NO_SNAP - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_SNAP_AFTER - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
GRID_SNAP_DURING - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes

## H

handleAddExistingInstance() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleBrowserTextChanged(Frame) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
handleCreateInstance() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleDeleteSelectedInstances() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleDoubleClick() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleExportRequest(Project) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportPlugin
handleOwnSlotValueChanged(FrameEvent) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
handleOwnSlotValueChanged(FrameEvent) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handlePerformAutomaticLayout(int) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleRemoveSelectedInstances() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleSaveAsImage() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
handleSelectionChange() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
handleSelectionChange() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
handleViewSelectedInstances() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
hasReifiedRelations() - Method in class edu.stanford.smi.protegex.widget.graph.RelationConfigurationPanel
hasTextWrap() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
hasValidConnectorSlot() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
hasValidRelations() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
HEIGHT - Static variable in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
Helper - Class in edu.stanford.smi.protegex.queries_tab.toolbox
HEXAGON - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
HIERARCHICAL_INCLUDE_EVERYTHING - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
HIERARCHICAL_OMIT_ROOTS - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
HIERARCHICAL_ONLY_INCLUDE_LEAVES - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
HIERARCHICAL_ONLY_INCLUDE_LEVEL_1_CHILDREN - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
highlightInstances(Collection, Color) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
HorizontalTextPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
HorizontalTextPanel(String) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.HorizontalTextPanel
HorizontalWidgetBoxLayoutManager - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
HorizontalWidgetBoxLayoutManager() - Constructor for class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetBoxLayoutManager
HorizontalWidgetSeparator - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
HorizontalWidgetSeparator(int) - Constructor for class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetSeparator
HorizontalWidgetWrapperHolder - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
HorizontalWidgetWrapperHolder() - Constructor for class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetWrapperHolder
HorizontalWidgetWrapperHolder(int, boolean) - Constructor for class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetWrapperHolder
HorizontalWidgetWrapperHolder(int, boolean, int, int) - Constructor for class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetWrapperHolder
HTMLExport - Class in edu.stanford.smi.protegex.export.html
HTMLExport(ExportConfiguration) - Constructor for class edu.stanford.smi.protegex.export.html.HTMLExport
HTMLExportConfigDialog - Class in edu.stanford.smi.protegex.export.html
HTMLExportConfigDialog(Frame, String, boolean, Project, File) - Constructor for class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
HTMLExportException - Exception in edu.stanford.smi.protegex.export.html
HTMLExportException() - Constructor for exception edu.stanford.smi.protegex.export.html.HTMLExportException
HTMLExportPlugin - Class in edu.stanford.smi.protegex.export.html
HTMLExportPlugin() - Constructor for class edu.stanford.smi.protegex.export.html.HTMLExportPlugin

## I

Icons - Class in edu.stanford.smi.protegex.widget.uri
  Description of the class
Icons() - Constructor for class edu.stanford.smi.protegex.widget.uri.Icons
ImageMapPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Handles all the display and translation into display coordinates The rest of the widgets all deal with the "logical coordinate" system.
ImageMapPanel(ImageMapState) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
ImageMapPanelAdapter - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
ImageMapPanelAdapter() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
ImageMapPanelEventSupport - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
ImageMapPanelEventSupport() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
ImageMapPanelListener - Interface in edu.stanford.smi.protegex.widget.imagemap
  Description of the Interface
ImageMapState - Class in edu.stanford.smi.protegex.widget.imagemap
  All the configurable state for an ImageMapToSymbolWidget is stored here.
ImageMapState(ImageMapWidget) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
ImageMapWidget - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
ImageMapWidget() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
ImageMapWidgetConfigurationPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
ImageMapWidgetConfigurationPanel(ImageMapWidget) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidgetConfigurationPanel
IN_PLACE_EDITING - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
initGraphDocument(Collection) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
initialize() - Method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
initialize() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
initialize(String[], String[], Collection) - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
initialize() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
initialize() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstancesQuery
initialize(QueryListModel) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
initialize(String[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotModel
initialize() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
initialize(Point, String, String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
initialize(String) - Method in class edu.stanford.smi.protegex.widget.graph.SimpleLink
initialize() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
initialize() - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
initialized() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
initialized() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Called after project and kb are set.
initNode(Node) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
initNodes(Collection) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
InPlaceEditingConfigurationPanel - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
InPlaceEditingConfigurationPanel(AbstractTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
insertBRForNewline(String) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
insertItemAt(int, Object) - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
insertPointIntoLink() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
insertString(int, String, AttributeSet) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
InspectURIAction - Class in edu.stanford.smi.protegex.widget.uri
  Description of the class
InspectURIAction(String) - Constructor for class edu.stanford.smi.protegex.widget.uri.InspectURIAction
instance - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetValue
INSTANCE_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
Instance_Filling - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
Instance_Filling(ScatterboxWidget, Slot, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.Instance_Filling
InstanceEditor_PullDownMenu - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
InstanceEditor_PullDownMenu(JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_PullDownMenu
InstanceEditor_PullDownMenu(JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_PullDownMenu
InstanceEditor_UseDialog - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
InstanceEditor_UseDialog(String, JComponent, Project) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_UseDialog
InstanceEditor_UseDialog(String, JComponent, Project, Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.InstanceEditor_UseDialog
InstanceRowConfigurationChecks - Class in edu.stanford.smi.protegex.widget.instancetable
  Static methods to make sure that InstanceTable is valid.
InstanceRowConfigurationChecks() - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
InstanceRowConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceRowConfigurationPanel(InstanceTableWidget) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationPanel
InstanceRowWidget - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the class
InstanceRowWidget() - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
InstancesList - Class in edu.stanford.smi.protegex.queries_tab
InstancesList(Project) - Constructor for class edu.stanford.smi.protegex.queries_tab.InstancesList
instanceSlot - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
InstanceSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
InstanceSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Constructor.
InstanceSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Constructor with label, slot, and actions.
InstancesQuery - Class in edu.stanford.smi.protegex.queries_tab.toolbox
InstancesQuery(boolean) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.InstancesQuery
InstanceTable - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceTable(InstanceTableModel, AbstractTableWidgetCellEditor, boolean) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
InstanceTable(InstanceTableModel, boolean) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
InstanceTableButtonsConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceTableButtonsConfigurationPanel(ButtonRelatedWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableButtonsConfigurationPanel
InstanceTableConfigurationChecks - Class in edu.stanford.smi.protegex.widget.instancetable
  Static methods to make sure that InstanceTable is valid.
InstanceTableConfigurationChecks() - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
InstanceTableConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceTableConfigurationPanel(InstanceTableWidget) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationPanel
InstanceTableModel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceTableModel(InstanceTable, Collection, InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
InstanceTableWidget - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
InstanceTableWidget() - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
InstanceTableWidgetState - Class in edu.stanford.smi.protegex.widget.instancetable
  Stores list is slots to use as column and for each of these it stores a VisibleSlotDescription in a subproperty list Wrapper around property list Visible slot list property is a property list whose names are slots and whose values are property lists contained visible slot descriptions The order of slot names (columns) in the table is maintained in the top level property list as a set of names VISIBLE_SLOT_INDEX_N State consists of three things-- A set of visible slot descriptions An ordering on visible slot descriptions Information on the global editing model of the widget In addition, we have an extensive query API (so that the associated TableModel is fairly simple)
InstanceTableWidgetState(PropertyList, Collection, KnowledgeBase) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
InstanceTermPropertiesConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
InstanceTermPropertiesConfigurationPanel(ScatterboxWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.InstanceTermPropertiesConfigurationPanel
INTEGER_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
Integer_Filling - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
Integer_Filling(ScatterboxWidget, Slot, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.Integer_Filling
IntegerEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
IntegerEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.IntegerEditor
IntegerEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.IntegerEditor
IntegerSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
IntegerSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Constructor.
IntegerSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Constructor with label, slot, and actions.
IntegerTemplateSlotValidator - Class in edu.stanford.smi.protegex.queries_tab.toolbox
  Description of the class
IntegerTemplateSlotValidator(Cls, Slot) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerTemplateSlotValidator
INVERTED_TRIANGLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
invertSelected() - Method in class edu.stanford.smi.protegex.export.html.FrameData
isAutocreateWhenEditing() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
isAutomaticallyDisplayFormsForCreatedInstances() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
isAutoSelectInsertions() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
isBold() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
isCellEditable(EventObject) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTable
isCellEditable(EventObject) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
isCellEditable(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
isComplete() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
isComplete() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  whether the seach is done or not
isContainInVerticalDirection() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isCreateFormForNewInstances() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isCreateFormForNewInstances() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
isCurrentlyDragging() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
isCustomized() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
isDataFlavorSupported(DataFlavor) - Method in class edu.stanford.smi.protegex.widget.scatterbox.TransferableCell
isDisplayAddInstanceButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplayBrowserKeysOfSubordinateInstances() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isDisplayCreateInstanceButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplayDeleteInstanceButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplayMoveInstanceButtons() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplayPrototypeButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplayRemoveInstanceButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isDisplaySummaryPanel() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isDisplayTicks() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
isDisplayTotalNumberOfSubordinateInstances() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isDisplayViewInstanceButton() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
isEditable() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
isEditInPlace() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
isEmptySearchPanel() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
  if the search Parts are empty, return true, otherwise, return false.
isEnabled() - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
isEnabled() - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
isHighlightSelectedRow() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
isIncludeAbstractClassesInTermList() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
isInsertAtCurrentSelection() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isItalic() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
isLink(Element) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
  Returns true if the Element contains a HTML.Tag.A attribute, false otherwise.
isManagingFocus() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
  Deprecated.
isManagingFocus() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
  Deprecated.
isMatchAll() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
isReady() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
isSelected() - Method in class edu.stanford.smi.protegex.export.html.FrameData
isSelectionEmpty() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
isSelectNewInsertions() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isSeparatorUsedBetweenSubwidgets() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isSlotEditable() - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  If the slot is single value, return true.
isSlotSingleValued() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  If is a single value slot, set as true.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Set the slot not a single value slot.
isSlotSingleValued() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Set the slot not a single value slot.
isSubwidgetSelectionAllowed() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
isSuitable(Project) - Static method in class edu.stanford.smi.protegex.export.html.HTMLExportPlugin
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
isSuitable(Cls, Slot, Facet, KBQueryUtils) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntryScatterboxConfigurationChecks
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntryScatterboxWidget
isSuitable(Cls, Slot, Facet, KBQueryUtils) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryScatterboxConfigurationChecks
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryScatterboxWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
isSuitable(Cls, Slot, Facet) - Static method in class edu.stanford.smi.protegex.widget.uri.URIWidget
isTextDisplayed() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
isTextDisplayed() - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
isThereASelection() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
isUseDialog() - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
isUseDialogToSelectClasses() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
isUseDialogToSelectInstances() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
isUseSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
isUseSeparators() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
isValid(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
isValueAcceptable() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
isValueAcceptable() - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
isValueAcceptable() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
isViewEnabled - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
isViewEnabled() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
isViewEnabled() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
isVisible() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  get visible
isVisible() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  get visible
itsComp - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsInstance - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsInstances - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
itsKBListener - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsLabeledComponent - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsList - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsList - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsModel - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsName - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsRemoveAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsRemoveAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsSelectAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsSelectAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsSlot - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
itsTab - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
itsTab - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsViewAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
itsViewAction - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
itsWidget - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget

## K

KAPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Wraps an ImageMapPanel and does stuff.
KAPanel(ImageMapWidget) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.KAPanel
KBQueryUtils - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
keyPressed(KeyEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
keyReleased(KeyEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
keyTyped(KeyEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener

## L

label - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
LABEL_BOLD - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
LABEL_ITALIC - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
LABEL_RGB_BLUE - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
LABEL_RGB_GREEN - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
LABEL_RGB_RED - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
layoutChildren() - Method in class edu.stanford.smi.protegex.widget.graph.Node
layoutContainer(Container) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
layoutItems() - Method in class edu.stanford.smi.protegex.widget.graph.GraphPalette
LINE_DISPLAY_TEXT - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
LINE_RGB_BLUE - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
LINE_RGB_GREEN - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
LINE_RGB_RED - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
LINE_TYPE - Static variable in class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
LINE_WIDTH - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
LineView - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the Class Line whose width is equal to the value of the annotated slider position
LineView() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.LineView
LineView(Color) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.LineView
LinkUtilities - Class in edu.stanford.smi.protegex.widget.graph
  This class contains the logic for whether or not the user can draw a line between two nodes.
LinkUtilities(KnowledgeBase, PropertyList, JGoPort, JGoPort) - Constructor for class edu.stanford.smi.protegex.widget.graph.LinkUtilities
listToStringArray(List) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.Helper
  Get the values from specified list and return them as a string array.
listToStringArray(List) - Static method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Transfer list to a string of array.
load(Object) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTabRenderer
LocalizedText - Class in edu.stanford.smi.protegex.util
LocalizedText() - Constructor for class edu.stanford.smi.protegex.util.LocalizedText
logicalClick(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalClick(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener
logicalDrag(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalDrag(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener
logicalDragFinished(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalDragFinished(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener
logicalDragStarted(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalDragStarted(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener
logicalPress(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalPress(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener
logicalRelease(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelAdapter
logicalRelease(Point) - Method in interface edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelListener

## M

main(String[]) - Static method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.graph.Node_Test
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowWidget
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
main(String[]) - Static method in class edu.stanford.smi.protegex.widget.uri.URIWidget
MainConfigurationPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
MainConfigurationPanel(ImageMapWidget) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.MainConfigurationPanel
MainConfigurationPanel - Class in edu.stanford.smi.protegex.widget.slider
  Responsible for (1) Setting value class type (2) Adding and removing index definitions (3) setting the x index (4) setting the y index aggregates the objects in configuration.mainconfigurationpanel
MainConfigurationPanel(SliderWidget) - Constructor for class edu.stanford.smi.protegex.widget.slider.MainConfigurationPanel
makeAllNodesDefaultSize() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
makeFirstPassAtBoxDimensions() - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetBoxLayoutManager
makeFirstPassAtBoxDimensions() - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetBoxLayoutManager
makeFirstPassAtBoxDimensions() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
makeSimpleLink() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
makeSlotVisible(Slot) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
mapPointIntoFirstRect(int, int) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
mapPointIntoFirstRect(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
mapPointIntoSecondRect(int, int) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
mapPointIntoSecondRect(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
mapRectIntoFirstRect(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
mapRectIntoSecondRect(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
MatchInstances - Class in edu.stanford.smi.protegex.queries_tab
MatchInstances() - Constructor for class edu.stanford.smi.protegex.queries_tab.MatchInstances
MatchInstances(QueriesTab, Cls, boolean, Vector) - Constructor for class edu.stanford.smi.protegex.queries_tab.MatchInstances
minimumLayoutSize(Container) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
mouseClicked(MouseEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
mouseEntered(MouseEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
mouseExited(MouseEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
mousePressed(MouseEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
mousePressed(MouseEvent) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget.SlotValueWidgetMouse
mousePressed(MouseEvent) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget.QueryListWidgetMouse
mouseReleased(MouseEvent) - Method in class edu.stanford.smi.protegex.export.html.CheckListener
MOVE_INSTANCE_BUTTONS_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
MOVE_INSTANCE_BUTTONS_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
moveSlotToIndex(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
moveValue(Instance, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
moveValueInternal(Instance, int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget

## N

needsToStoreChanges() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
needsToStoreChanges() - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
needsToStoreChanges() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
NewInstanceConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
NewInstanceConfigurationPanel(InstanceTableWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.NewInstanceConfigurationPanel
newLink(JGoPort, JGoPort) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
Node - Class in edu.stanford.smi.protegex.widget.graph
  An area that represents a graph node.
Node() - Constructor for class edu.stanford.smi.protegex.widget.graph.Node
NODE_DISPLAY_NAME - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
NODE_HEIGHT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
NODE_RGB_BLUE - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
NODE_RGB_GREEN - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
NODE_RGB_RED - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
NODE_SHAPE - Static variable in class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
Node_Test - Class in edu.stanford.smi.protegex.widget.graph
Node_Test() - Constructor for class edu.stanford.smi.protegex.widget.graph.Node_Test
NODE_WIDTH - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
NodeConfigurationPanel - Class in edu.stanford.smi.protegex.widget.graph
NodeConfigurationPanel(ArrayList, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.NodeConfigurationPanel
NodeLabel - Class in edu.stanford.smi.protegex.widget.graph
NodeLabel() - Constructor for class edu.stanford.smi.protegex.widget.graph.NodeLabel
NodeLabel(String) - Constructor for class edu.stanford.smi.protegex.widget.graph.NodeLabel
NodePort - Class in edu.stanford.smi.protegex.widget.graph
NodePort() - Constructor for class edu.stanford.smi.protegex.widget.graph.NodePort
NodeProperties - Class in edu.stanford.smi.protegex.widget.graph
NodeProperties(String, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.NodeProperties
NodePropertyNames - Class in edu.stanford.smi.protegex.widget.graph
NodePropertyNames() - Constructor for class edu.stanford.smi.protegex.widget.graph.NodePropertyNames
NONE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
NULL_SELECTED_COLOR - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
NULL_STRING - Static variable in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
NUMBER_OUT_OF_BOUNDS - Static variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
NumberOfSlotValuesComponent - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
NumberOfSlotValuesComponent(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.contains.NumberOfSlotValuesComponent

## O

ObjectStorer - Class in edu.stanford.smi.protegex.util
  This class defines static methods which can be used to help store a bean in a Protege property list.
ObjectStorer() - Constructor for class edu.stanford.smi.protegex.util.ObjectStorer
OCTAGON - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
okButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
onCheckURI() - Method in class edu.stanford.smi.protegex.widget.uri.CheckURIAction
onInspectURI() - Method in class edu.stanford.smi.protegex.widget.uri.InspectURIAction
onKeyEvent(KeyEvent) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
onSelectionChange() - Method in class edu.stanford.smi.protegex.queries_tab.InstancesList
Order - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
OverallAppearanceConfigurationPanel - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
OverallAppearanceConfigurationPanel(ContainsWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.contains.OverallAppearanceConfigurationPanel
OverallAppearanceConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
OverallAppearanceConfigurationPanel(ScatterboxWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.OverallAppearanceConfigurationPanel

## P

PagedFrameList - Class in edu.stanford.smi.protegex.util
PagedFrameList(String) - Constructor for class edu.stanford.smi.protegex.util.PagedFrameList
paint(Graphics) - Method in class edu.stanford.smi.protegex.util.ColorPanel
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetSeparator
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetSeparator
paint(Graphics2D, JGoView) - Method in class edu.stanford.smi.protegex.widget.graph.NodeLabel
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.imagemap.ColorPanel
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.imagemap.LineView
paint(Graphics) - Method in class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
paintIcon(Component, Graphics, int, int) - Method in class edu.stanford.smi.protegex.widget.graph.ColorIcon
PENTAGON - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
performAutomaticLayout(int) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
performTask(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.AddButton
performTask(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.CreateButton
performTask(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.RemoveButton
performTask(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
performTask(int, int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ViewButton
popQuery() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
postWarningDialog(String) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
preferredLayoutSize(Container) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
preferredSize - Variable in class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
processFocusEvent(FocusEvent) - Method in class edu.stanford.smi.protegex.util.ColorWell
processFocusEvent(FocusEvent) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
processUserSelection() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
processViewChange(JGoViewEvent) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
PROTOTYPE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
PROTOTYPE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
PROTOTYPE_DEPTH - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
PrototypingAndCreationConfigurationPanel - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
PrototypingAndCreationConfigurationPanel(ContainsWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.contains.PrototypingAndCreationConfigurationPanel
PrototypingAndCreationConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
PrototypingAndCreationConfigurationPanel(ScatterboxWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.PrototypingAndCreationConfigurationPanel
pushQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
put(Object, Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
putAll(Map) - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
putEntryAtPoint(Instance, Point) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject

## Q

qCheckStatus - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qClasses - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qClassesNames - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qObjects - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qObjectsNames - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qOperations - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qSlots - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
qSlotsNames - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
QueriesTab - Class in edu.stanford.smi.protegex.queries_tab
QueriesTab() - Constructor for class edu.stanford.smi.protegex.queries_tab.QueriesTab
QueriesTabRenderer - Class in edu.stanford.smi.protegex.queries_tab
QueriesTabRenderer() - Constructor for class edu.stanford.smi.protegex.queries_tab.QueriesTabRenderer
query - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQueryListWidget
QueryDialogPanel - Class in edu.stanford.smi.protegex.queries_tab
QueryDialogPanel(InstancesQuery, QueriesTab) - Constructor for class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
QueryListModel - Class in edu.stanford.smi.protegex.queries_tab
QueryListModel() - Constructor for class edu.stanford.smi.protegex.queries_tab.QueryListModel
QueryListModel(Vector) - Constructor for class edu.stanford.smi.protegex.queries_tab.QueryListModel
QueryListWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
QueryListWidget(QueriesTab) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
QueryListWidget(String, QueriesTab) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
QueryListWidget(String, QueryListModel, QueriesTab) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
QueryListWidget.QueryListWidgetMouse - Class in edu.stanford.smi.protegex.queries_tab.toolbox
  Define table mouse adapter.
QueryListWidget.QueryListWidgetMouse(QueryListWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget.QueryListWidgetMouse
QueryNamePanel - Class in edu.stanford.smi.protegex.queries_tab.toolbox
QueryNamePanel() - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.QueryNamePanel
QueryRecord - Class in edu.stanford.smi.protegex.queries_tab
QueryRecord(int, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.QueryRecord

## R

RANGE_VALUE_SLOT - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairConstants
RANGE_VALUE_SLOTS - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
readBoolean(String, boolean) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
readFromPropertyList(PropertyList) - Method in class edu.stanford.smi.protegex.util.ObjectStorer
readInt(String, int) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
readObjectFromPropertyList(PropertyList, Object) - Static method in class edu.stanford.smi.protegex.util.ObjectStorer
readString(String, String) - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
reallyPaint(Graphics2D) - Method in class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
reallyPaint(Graphics2D) - Method in class edu.stanford.smi.protegex.widget.scatterbox.HorizontalTextPanel
reallyPaint(Graphics2D) - Method in class edu.stanford.smi.protegex.widget.scatterbox.VerticalTextPanel
reconstituteObjectFromString(String) - Static method in class edu.stanford.smi.protegex.util.SerializationSupport
RECTANGLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
RectangleConfigurationPanel - Class in edu.stanford.smi.protegex.widget.imagemap
  Wraps an ImageMapPanel and does stuff.
RectangleConfigurationPanel(ImageMapWidget) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
RECURSIVE_COPY_DEPTH_FOR_DND - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
RECURSIVE_COPYING - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
RecursiveCopy - Class in edu.stanford.smi.protegex.util
  Recursive copy of simple instances
RecursiveCopy() - Constructor for class edu.stanford.smi.protegex.util.RecursiveCopy
recursivelyCopyInstance(Instance, int) - Static method in class edu.stanford.smi.protegex.util.RecursiveCopy
recursivelyCopyInstance(Instance, int, List) - Static method in class edu.stanford.smi.protegex.util.RecursiveCopy
RELATION_SLOT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
RelationConfigurationPanel - Class in edu.stanford.smi.protegex.widget.graph
  Allows a user to choose which slot for a particular class will hold reified relations and configure the appearance of the relations.
RelationConfigurationPanel(Cls, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.RelationConfigurationPanel
RelationProperties - Class in edu.stanford.smi.protegex.widget.graph
RelationProperties(String, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.RelationProperties
RelationPropertyNames - Class in edu.stanford.smi.protegex.widget.graph
RelationPropertyNames() - Constructor for class edu.stanford.smi.protegex.widget.graph.RelationPropertyNames
reLink(JGoLink, JGoPort, JGoPort) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
REMOVE - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
remove(int, int) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneLinkDetector.HTMLDocLinkDetector
remove(Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.BiMap
REMOVE_INSTANCE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
REMOVE_INSTANCE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
removeActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
removeActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
removeActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
removeActionListener(ActionListener) - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
removeAllRectangles() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
removeAllWidgetWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
removeAllWidgetWrappers() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
RemoveButton - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
RemoveButton(ScatterboxWidget, ScatterboxTable, ScatterboxTableModel, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.RemoveButton
removeCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
removeCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.abstracttable.TableEditorListenerManager
removeCellEditorListener(CellEditorListener) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
removeEntry(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
removeImageMapPanelListener(ImageMapPanelListener) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
removeImageMapPanelListener(ImageMapPanelListener) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
removeInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
removeLayoutComponent(Component) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
removeListener() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
removeListener() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
removeListener() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
removeListener() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
removeMouse() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
removeMouse() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
removeMouse() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
removeMouseListener() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
removeName(String) - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
removeQuery(int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
removeRectangle(Rectangle, Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
removeSegmentFromLink() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
removeSelectionObserver(ScatterboxWidgetListener) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
removeValue(Instance) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
removeValueFromSourceNode(SimpleLink) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
removeValues(Collection) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
removeVisibleSlotDescriptionAtIndex(int) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
removeWidgetWrapper(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
removeWidgetWrapper(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
removeWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
removeWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
removeWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in interface edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessor
removeWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessorImpl
removeWidgetWrapperActionListener(WidgetWrapperActionListener) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
replaceEntry(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
replaceObject(Object, int) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
ReservedConstants - Interface in edu.stanford.smi.protegex.util
  The protegex utils are pieces of funcitonality that are used across several distinct widgets.
resolveComplexLinks(Node) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
restore() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
restore() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
restore() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
restore() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
restore() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
restore() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
restore() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
restore() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
restoreComplexLink(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
restoreSimpleLink() - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
returnToPool() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
returnWidgetWrapper(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperPool
ROUNDED_RECTANGLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
RowHeader - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
RowHeader(Order) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.RowHeader
RowHeaderTableModel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
RowHeaderTableModel(Order) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.RowHeaderTableModel

## S

save() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
save() - Method in class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
save() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetState
save() - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
save() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
save() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
save() - Method in class edu.stanford.smi.protegex.widget.graph.GraphProperties
save() - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
save() - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
save() - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
save() - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
save() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
save() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
save() - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
saveButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protegex.export.html.HTMLExportConfigDialog
saveContents() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.graph.GraphConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.graph.NodeConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.graph.RelationConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.graph.ViewConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.imagemap.MainConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.ColumnConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.NewInstanceConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.WarningsConfigurationPanel
saveContents() - Method in class edu.stanford.smi.protegex.widget.slider.MainConfigurationPanel
saveGraphAsImage() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
savePositionInfo() - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
ScatterboxAction - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxAction(ScatterboxWidget, String, Icon, ScatterboxTable, ScatterboxTableModel, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
ScatterboxDNDObject - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxDNDObject(ScatterboxWidget, ScatterboxTable, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
ScatterboxInPlaceEditingConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxInPlaceEditingConfigurationPanel(ScatterboxWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxInPlaceEditingConfigurationPanel
ScatterboxTable - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTable(ScatterboxTableModel, ScatterboxWidget, ScatterboxTableCellEditor, boolean, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
ScatterboxTable(ScatterboxTableModel, ScatterboxWidget, boolean, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
ScatterboxTableCellEditor - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTableCellEditor(ScatterboxWidget, ScatterboxWidgetState, JTable, Project, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableCellEditor
ScatterboxTableCellRenderer - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTableCellRenderer(ScatterboxWidget, Color, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableCellRenderer
ScatterboxTableDragGestureListener - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTableDragGestureListener(ScatterboxWidget, ScatterboxTable, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragGestureListener
ScatterboxTableDragSourceListener - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTableDragSourceListener(ScatterboxWidget, ScatterboxTable, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDragSourceListener
ScatterboxTableDropTargetListener - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxTableDropTargetListener(ScatterboxWidget, ScatterboxTable, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableDropTargetListener
ScatterboxTableModel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Stores, and returns, entries.
ScatterboxTableModel(ScatterboxWidget, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
ScatterboxWidget - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Class
ScatterboxWidget() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
ScatterboxWidgetConfigurationPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxWidgetConfigurationPanel(ScatterboxWidget) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetConfigurationPanel
ScatterboxWidgetListener - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
scatterboxWidgetSelectionChanged() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
scatterboxWidgetSelectionChanged() - Method in interface edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetListener
ScatterboxWidgetState - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ScatterboxWidgetState(ScatterboxWidget, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
scrollToCorrectLocation() - Method in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetWrapperHolder
scrollToCorrectLocation() - Method in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetWrapperHolder
scrollToCorrectLocation() - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
search() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  For the formed search result, change the format.
search() - Method in class edu.stanford.smi.protegex.queries_tab.MatchInstances
search() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Search method in the searchWidget.
search(Collection) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
search() - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Performs the search for the specified string with the given search context.
search(Collection, Slot, String, Object) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  This is used to call for the Query settings.
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
search(Collection, String, Slot) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
search() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
search(Collection, Slot, String, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
searchQueryStack(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
searchStyle - Variable in class edu.stanford.smi.protegex.queries_tab.SearchWidget
SearchWidget - Class in edu.stanford.smi.protegex.queries_tab
SearchWidget(QueriesTab, KnowledgeBase) - Constructor for class edu.stanford.smi.protegex.queries_tab.SearchWidget
SearchWidget(QueriesTab, KnowledgeBase, String[], String[], Collection) - Constructor for class edu.stanford.smi.protegex.queries_tab.SearchWidget
SecondaryView - Interface in edu.stanford.smi.protegex.widget.imagemap
  Description of the Interface
selectAll() - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
selectedItemChanged() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
selectEntry(Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
selectInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
selectInstanceIfAppropriate(Instance) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
selection - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
selectionChanged() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
SelectPanel - Class in edu.stanford.smi.protegex.queries_tab.toolbox
SelectPanel(Collection) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SelectPanel
selectValueInComboBox() - Method in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
selectValueInComboBox() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
SerializationSupport - Class in edu.stanford.smi.protegex.util
  A simple class, designed to help us store state in strings.
SerializationSupport() - Constructor for class edu.stanford.smi.protegex.util.SerializationSupport
serializeObjectToString(Object) - Static method in class edu.stanford.smi.protegex.util.SerializationSupport
setActionsEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Enable/Disable the icons.
setActionsEnabled(boolean) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
setActionsEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
setActionsEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
setActionsEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
setActionsEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
setActivation() - Method in class edu.stanford.smi.protegex.widget.scatterbox.AddButton
setActivation() - Method in class edu.stanford.smi.protegex.widget.scatterbox.CreateButton
setActivation() - Method in class edu.stanford.smi.protegex.widget.scatterbox.RemoveButton
setActivation() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
setActivation() - Method in class edu.stanford.smi.protegex.widget.scatterbox.ViewButton
setAddInstanceButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setAddInstanceDialogTitle(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setAllFrames(List<FrameWithBrowserText>) - Method in class edu.stanford.smi.protegex.util.PagedFrameList
setArrowheadType(String) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setArrowheadType(String) - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
setAutocreateWhenEditing(Boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setAutocreateWhenEditing(boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setAutomaticallyDisplayFormsForCreatedInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setAutomaticallyDisplayFormsForCreatedInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setAutoSelectInsertions(Boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setAutoSelectInsertions(boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setBold(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setBrush(JGoBrush) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setButtonDisplayed(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
setButtonDisplayed(boolean) - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
setClass(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  This is used to set whole class
setClass2(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setCls(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Setup the selected cls
setCls(Cls) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Setup the selected cls
setCls(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Overwrite the setCls to setup the selected cls
setCls(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Overwrite the setCls to setup the selected cls
setColor(Color) - Method in class edu.stanford.smi.protegex.util.ColorPanel
setColor(Color) - Method in class edu.stanford.smi.protegex.util.ColorWell
setColor(Color) - Method in class edu.stanford.smi.protegex.widget.graph.ColorIcon
setColor(Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ColorPanel
setColumnToOrder(Order) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setColumnToOrder(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setComplexLinkValues(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.LinkUtilities
setConnectorSlot(String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setConnectorSlot(String) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setConstraint(String) - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
setContainInVerticalDirection(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setContainInVerticalDirection(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setContents(Collection) - Method in class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
setContents(Collection) - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
setCreateFormForNewInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setCreateFormForNewInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setCreateFormForNewInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setCreateFormForNewInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setCreateInstanceButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setCreateInstanceDialogTitle(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setCSSPath(String) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setCurrentlyDraggingOverColumn(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
setCurrentlyDraggingOverRow(int) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
setCustomDisplayName(String) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setCustomWrapWidth() - Method in class edu.stanford.smi.protegex.widget.graph.NodeLabel
setData(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Set the suitable data for each slotvaluewidget.
setData(Object[]) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  An array of Objects are passed in that should be displayed.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Set the specified string to the text area.
setData(Object[]) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Set the specified string to the text area.
setData2(Cls) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Set the suitable data for each slotvaluewidget.
setDeleteInstanceButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDialogTitle(String) - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
setDialogTitle(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
setDialogTitleForSelectingClasses(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDialogTitleForSelectingInstances(String) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayAddInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayAddInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayAddInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayAddInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayBrowserKeysOfSubordinateInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplayBrowserKeysOfSubordinateInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplayCreateInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayCreateInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayCreateInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayCreateInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayDeleteInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayDeleteInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayedSlot(Slot) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Set the input instance as the selected classs
setDisplayMoveInstanceButtons(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayName(String) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
setDisplayName(String) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
setDisplayName(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
setDisplayPrototypeButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayPrototypeButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayRemoveInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayRemoveInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayRemoveInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayRemoveInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplaySummaryPanel(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplaySummaryPanel(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplayText(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setDisplayText(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
setDisplayTicks(Boolean) - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
setDisplayTicks(boolean) - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
setDisplayTotalNumberOfSubordinateInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplayTotalNumberOfSubordinateInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setDisplayViewInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayViewInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setDisplayViewInstanceButton(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDisplayViewInstanceButton(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setDomainObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
setDomainObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
setDomainObject(Instance, Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
setDomainObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
setEditable(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
setEditable(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
setEditable(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
setEditable(boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
setEditable(boolean) - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
setEditable(boolean) - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
setEditInPlace(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setEditInPlace(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setEditor(AbstractTableWidgetCellEditor) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
setEditor(AbstractTableWidgetCellEditor) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTable
setEditor(AbstractTableWidgetCellEditor) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
setEnabledBySelection() - Method in class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
setEntries(Collection) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setExternalUpdate(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.GraphDocument
setFacetsToDisplay(ArrayList) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setFirstCoordinateSystem(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
setFlipX(boolean) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
setFlipY(boolean) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
setFooterPath(String) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setGridStyle(String) - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
setHeaderPath(String) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setHierarchicalPolicyWhenClassesAreDomainIndices(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setHighlightSelectedRow(Boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setHighlightSelectedRow(boolean) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidgetState
setHorizontalAxisLabel(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setHorizontalSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setImageLocation(URI) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setIncludeAbstractClassesInTermList(boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setInsertAtCurrentSelection(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setInsertAtCurrentSelection(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
setInstance(Instance) - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.FormDescription
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.NumberOfSlotValuesComponent
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.SummaryPanel
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.ComplexLink
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
setInstance(Instance) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setInstances(Collection) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Setup the instances collection
setInstances(Collection) - Method in class edu.stanford.smi.protegex.queries_tab.InstancesList
  This is the part of code which is different from directInstancesList
setInstances(Collection) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Setup the instances collection
setIsCurrentlyDragging(boolean) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
setItalic(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setItem(Object) - Method in class edu.stanford.smi.protegex.widget.graph.ComboBoxColorEditor
setLineColor(Color) - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
setLineThickness(int) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setLineType(String) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setLineType(String) - Method in class edu.stanford.smi.protegex.widget.graph.RelationProperties
setLogicalCoordinateSystem(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setMatchAll(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
setModel(TableModel) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
setMoveInstanceButtonsTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setName(String) - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
setName(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractQuery
setName(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
setName(String) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
setObjectsViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setOutputDir(String) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setOWLMode(boolean) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneComponent
setOwner(ImageMapWidget) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setPageLocation(int) - Method in class edu.stanford.smi.protegex.util.PagedFrameList
setPageSize(int) - Method in class edu.stanford.smi.protegex.util.PagedFrameList
setPen(JGoPen) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setPolicyWhenInstancesAreDomainIndices(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setPreferredWidthForColumn(int, int) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
setPreferredWidthForColumn(int, int) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTable
setProject(Project) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setProject(Project) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Set the Protege project.
setProject(Project) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Each widget will have a pointer to the project so it can interact with the Protege knowledge base.
setPrototypeButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setPrototypeDepth(int) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setPrototypeDepth(Integer) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
setQueryButtons() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
setQueryName(String) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
setRangeObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicQueryObject
setRangeObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.DomainRangeObjectPairEntry
setRangeObject(Instance, Instance) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.KBQueryUtils
setRangeObject(Instance, Instance) - Method in class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
setReady(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setRectangleForSymbol(Rectangle, String) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setRemoveInstanceButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setRootClasses(ArrayList) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setRowToOrder(Order) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setRowToOrder(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setSecondCoordinateSystem(Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.CoordinateTransform
setSelected(boolean) - Method in class edu.stanford.smi.protegex.export.html.FrameData
setSelectedItem(Object) - Method in class edu.stanford.smi.protegex.util.AlphabeticalComboBoxModel
setSelectedItem(Object) - Method in class edu.stanford.smi.protegex.util.EditableComboBoxModel
setSelectedObject(Object) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Set the displayed selected object.
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.BooleanSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.FloatSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.IntegerSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
setSelectedObject(Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
setSelectedObjects(Object[], String[]) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setSelection(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
setSelectionColor(Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setSelectNewInsertions(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSelectNewInsertions(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSelectSlotName() - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setSeparatorUsedBetweenSubwidgets(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSeparatorUsedBetweenSubwidgets(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setShape(String) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setShapeColor(Color) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setShowInstances(boolean) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setShowSelectedRectanglesDuringKA(boolean) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setShowTooltips(boolean) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setSize(int, int) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
setSlot(Slot) - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
setSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
setSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
setSlot(Slot) - Method in interface edu.stanford.smi.protegex.widget.scatterbox.Order
setSlotName(String) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Set the name of the slot for this relation display.
setSlotsToDisplay(ArrayList) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setSnapOnMove(String) - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
setSortSubclasses(boolean) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setSpaceBetweenSubwidgets(int) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSpacerSize(int) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
setSpacerSize(int) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
setSpecification(SlotSpecification) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Setup the search specification.
setSpecification(SlotSpecification) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Setup the search specification.
setSubwidgetSelectionAllowed(Boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSubwidgetSelectionAllowed(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidgetState
setSymbolForRectangle(String, Rectangle) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setTabComponents() - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
  Setup the layout of the tab
setTableColumnWidths() - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
setText(String) - Method in class edu.stanford.smi.protegex.widget.graph.ComplexLink
setText(String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setText(String) - Method in class edu.stanford.smi.protegex.widget.graph.SimpleLink
setTextColor(Color) - Method in class edu.stanford.smi.protegex.widget.graph.NodeProperties
setTextWrap(boolean) - Method in class edu.stanford.smi.protegex.widget.graph.ViewProperties
setTickIncrement(int) - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
setTickIncrement(Integer) - Method in class edu.stanford.smi.protegex.widget.slider.SliderProperties
setTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonInformationPanel
setTooltip(String) - Method in class edu.stanford.smi.protegex.util.ExtendedButtonInformationPanel
setTooltipColor(Color) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapState
setType(String) - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
setUnderlyingTable(InstanceTable) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
setUnderlyingTable(ScatterboxTable) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTableModel
setUniqueName(String) - Method in class edu.stanford.smi.protegex.widget.graph.Node
setUpComboBox(String) - Method in class edu.stanford.smi.protegex.queries_tab.ConstraintsModel
setUpComboBox(String) - Method in class edu.stanford.smi.protegex.queries_tab.SlotsModel
setUpComboBox() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotModel
setupRadios(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
setupStatus(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
  Switch buttons and radios according to the settings.
setupStatus(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
  Switch buttons and radios according to the settings.
setUseDialog(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
setUseDialogToSelectClasses(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setUseDialogToSelectClasses(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setUseDialogToSelectInstances(Boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setUseDialogToSelectInstances(boolean) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
setUseHierarchicalFolders(boolean) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setUseNumbering(boolean) - Method in class edu.stanford.smi.protegex.export.html.ExportConfiguration
setUseSeparators(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetBox
setUseSeparators(boolean) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
setValue(Object) - Method in class edu.stanford.smi.protegex.queries_tab.SlotSpecification
setValue() - Method in class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
setValue(int) - Method in class edu.stanford.smi.protegex.widget.imagemap.LineView
setValue(int) - Method in interface edu.stanford.smi.protegex.widget.imagemap.SecondaryView
setValue(int) - Method in class edu.stanford.smi.protegex.widget.imagemap.TextView
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPanePlainWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.editorpane.EditorPaneWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.graph.GraphWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
setValues(Collection) - Method in class edu.stanford.smi.protegex.widget.uri.URIWidget
setVerticalAxisLabel(String) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setVerticalSlot(Slot) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidgetState
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
setViewEnabled(boolean) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
setViewEnabled(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
setViewInstanceButtonTooltip(String) - Method in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
setVisible(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
  Set visible
setVisible(boolean) - Method in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
  Set visible
setWidget(int) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Setup which one is displayed.
shouldSelectCell(EventObject) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
shouldSelectCell(EventObject) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
showDialog(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
showInstance(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
showInstance(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
showInstance(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
showInstance(Instance) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
showQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
showQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
SimpleLink - Class in edu.stanford.smi.protegex.widget.graph
SimpleLink() - Constructor for class edu.stanford.smi.protegex.widget.graph.SimpleLink
SimpleLink(JGoPort, JGoPort) - Constructor for class edu.stanford.smi.protegex.widget.graph.SimpleLink
singleAllowedClass(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
singleAllowedClass(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
singleAllowedClass(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
singleAllowedClass(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
SingleObjectEntry - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
SingleObjectEntry() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntry
SingleObjectEntryConstants - Interface in edu.stanford.smi.protegex.widget.scatterbox
  Description of the Interface
SingleObjectEntryScatterboxConfigurationChecks - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
SingleObjectEntryScatterboxConfigurationChecks() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryScatterboxConfigurationChecks
SingleObjectEntryScatterboxWidget - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
SingleObjectEntryScatterboxWidget() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.SingleObjectEntryScatterboxWidget
SixButtonsConfigurationPanel - Class in edu.stanford.smi.protegex.util
  Description of the Class
SixButtonsConfigurationPanel(ButtonRelatedWidgetState) - Constructor for class edu.stanford.smi.protegex.util.SixButtonsConfigurationPanel
SliderProperties - Class in edu.stanford.smi.protegex.widget.slider
  This is the "state" for the sliderwidget.
SliderProperties(PropertyList, Cls, Slot) - Constructor for class edu.stanford.smi.protegex.widget.slider.SliderProperties
SliderWidget - Class in edu.stanford.smi.protegex.widget.slider
  This object is the facade for the SliderWidget subsystem.
SliderWidget() - Constructor for class edu.stanford.smi.protegex.widget.slider.SliderWidget
SliderWidgetConfigurationPanel - Class in edu.stanford.smi.protegex.widget.slider
  Description of the class
SliderWidgetConfigurationPanel(SliderWidget) - Constructor for class edu.stanford.smi.protegex.widget.slider.SliderWidgetConfigurationPanel
slot - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetValue
slot - Variable in class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
slotHasRightCardinality(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
slotHasRightCardinality(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
slotHasRightCardinality(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
slotHasRightCardinality(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
slotName - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
slotsAreBound(Collection, Cls) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
slotsAreBoundedRange(Collection, Cls) - Static method in class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
SlotSelectWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
SlotSelectWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Constructor.
SlotSelectWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
  Constructor with label, slot, and actions.
SlotsModel - Class in edu.stanford.smi.protegex.queries_tab
SlotsModel(String[], String[], Collection) - Constructor for class edu.stanford.smi.protegex.queries_tab.SlotsModel
SlotSpecification - Class in edu.stanford.smi.protegex.queries_tab
SlotSpecification() - Constructor for class edu.stanford.smi.protegex.queries_tab.SlotSpecification
SlotSpecification(String, String, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.SlotSpecification
slotTargetOfTypeInstance(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
slotTargetOfTypeInstance(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceRowConfigurationChecks
slotTargetOfTypeInstance(Cls, Slot) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
slotTargetOfTypeInstance(Cls, Slot, JTextArea) - Static method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableConfigurationChecks
slotValueListMouse - Variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
SlotValueWidget - Interface in edu.stanford.smi.protegex.queries_tab
SOLID - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
SpacerButton - Class in edu.stanford.smi.protegex.util
  Disabled button used to space out other buttons (Unused?)
SpacerButton() - Constructor for class edu.stanford.smi.protegex.util.SpacerButton
specification - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
StandardScatterboxConfigurationChecks - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
StandardScatterboxConfigurationChecks() - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.StandardScatterboxConfigurationChecks
startReLink(JGoLink, JGoPort, Point) - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
stopCellEditing() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
stopCellEditing() - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableEditor
stopEditing() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
storeValueInKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
storeValueInKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
storeValueInKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
storeValueInKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
storeValueInKB() - Method in interface edu.stanford.smi.protegex.widget.abstracttable.TableEditorInterface
storeValueInKB() - Method in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
STRING_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
StringEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
StringEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.StringEditor
StringEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.StringEditor
StringSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
StringSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Constructor.
StringSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.StringSlotValueWidget
  Constructor with label, slot, and actions.
SummaryConfigurationPanel - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
SummaryConfigurationPanel(ContainsWidgetState) - Constructor for class edu.stanford.smi.protegex.widget.contains.SummaryConfigurationPanel
SummaryPanel - Class in edu.stanford.smi.protegex.widget.contains
  Number of slot values in a panel
SummaryPanel(ContainsWidget) - Constructor for class edu.stanford.smi.protegex.widget.contains.SummaryPanel
switchActions(boolean) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
SYMBOL_EDITOR - Static variable in interface edu.stanford.smi.protegex.util.ReservedConstants
Symbol_Filling - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
Symbol_Filling(ScatterboxWidget, Slot, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.Symbol_Filling
SymbolEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
SymbolEditor() - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
SymbolEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
SymbolSlotModel - Class in edu.stanford.smi.protegex.queries_tab.toolbox
SymbolSlotModel() - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotModel
SymbolSlotModel(String[]) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotModel
SymbolSlotValueWidget - Class in edu.stanford.smi.protegex.queries_tab.toolbox
SymbolSlotValueWidget(SearchWidget) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Constructor.
SymbolSlotValueWidget(SearchWidget, String, String) - Constructor for class edu.stanford.smi.protegex.queries_tab.toolbox.SymbolSlotValueWidget
  Constructor with label, slot, and actions.

## T

TableColorRenderer - Class in edu.stanford.smi.protegex.widget.graph
TableColorRenderer(boolean) - Constructor for class edu.stanford.smi.protegex.widget.graph.TableColorRenderer
TableEditorInterface - Interface in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Interface
TableEditorListenerManager - Class in edu.stanford.smi.protegex.widget.abstracttable
  Unused
TableEditorListenerManager(JTable) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.TableEditorListenerManager
TEXT_SCALING_FACTOR - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
TextFieldEditor - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
TextFieldEditor(Instance, Slot) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
TextView - Class in edu.stanford.smi.protegex.widget.imagemap
  Description of the class
TextView() - Constructor for class edu.stanford.smi.protegex.widget.imagemap.TextView
TextView(int) - Constructor for class edu.stanford.smi.protegex.widget.imagemap.TextView
theComparator - Static variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
TO_SLOT - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
toString() - Method in class edu.stanford.smi.protegex.export.html.FrameData
toString() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstancesQuery
toString() - Method in class edu.stanford.smi.protegex.widget.graph.GraphPoint
TransferableCell - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
TransferableCell(Instance, ScatterboxTable) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.TransferableCell
TRIANGLE - Static variable in interface edu.stanford.smi.protegex.widget.graph.GraphTypes
TWO_TIMES_BORDER_THICKNESS - Static variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder

## U

unselectWidgetWrapper(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
update(Observable, Object) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
update(Observable, Object) - Method in class edu.stanford.smi.protegex.queries_tab.QueryDialogPanel
update(Observable, Object) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.MainConfigurationPanel
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.instancetable.ConfigTableModel
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableModel
update(Observable, Object) - Method in class edu.stanford.smi.protegex.widget.slider.SliderWidget
updateActivation() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
updateActivation() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AddAction
updateActivation() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_CreateAction
updateActivation() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_PrototypeAction
updateHashMap(JFrame) - Method in class edu.stanford.smi.protegex.queries_tab.QueriesTab
updateKBIfNecessary() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetCellEditor
updateList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractListValueWidget
updateList() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
updateSearchWidget(String) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Update the corresponding search methods and the slotvaluewidgets.
updateView() - Method in class edu.stanford.smi.protegex.widget.graph.GraphView
updateWidget(int) - Method in class edu.stanford.smi.protegex.queries_tab.SearchWidget
  Setup which one is displayed.
upLoadQuery(InstancesQuery) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.QueryListWidget
  This is used to load the current available query to the search panel.
URIWidget - Class in edu.stanford.smi.protegex.widget.uri
  Description of the Class
URIWidget() - Constructor for class edu.stanford.smi.protegex.widget.uri.URIWidget
USE_ALL_INSTANCES - Static variable in interface edu.stanford.smi.protegex.widget.scatterbox.Constants
USE_DIALOG_TO_SELECT_CLASSES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
USE_DIALOG_TO_SELECT_INSTANCES - Static variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
UseDialogPanel - Class in edu.stanford.smi.protegex.widget.abstracttable
  Description of the Class
UseDialogPanel(String, String, boolean, String) - Constructor for class edu.stanford.smi.protegex.widget.abstracttable.UseDialogPanel
userClicked(Point) - Method in class edu.stanford.smi.protegex.widget.imagemap.ImageMapWidget

## V

VALID_NUMBER - Static variable in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
validateContents() - Method in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.abstracttable.InPlaceEditingConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.imagemap.MainConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.imagemap.RectangleConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.ColumnConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.NewInstanceConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.instancetable.WarningsConfigurationPanel
validateContents() - Method in class edu.stanford.smi.protegex.widget.slider.MainConfigurationPanel
validateString(String) - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.AbstractTemplateSlotNumberValidator
validLink(JGoPort) - Method in class edu.stanford.smi.protegex.widget.graph.NodePort
valueChanged(ListSelectionEvent) - Method in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
valueChanged() - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
valueChanged(ListSelectionEvent) - Method in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
values - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetValue
VerticalTextPanel - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
VerticalTextPanel(String) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.VerticalTextPanel
VerticalWidgetBoxLayoutManager - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
VerticalWidgetBoxLayoutManager() - Constructor for class edu.stanford.smi.protegex.widget.contains.VerticalWidgetBoxLayoutManager
VerticalWidgetSeparator - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
VerticalWidgetSeparator(int) - Constructor for class edu.stanford.smi.protegex.widget.contains.VerticalWidgetSeparator
VerticalWidgetWrapperHolder - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
VerticalWidgetWrapperHolder() - Constructor for class edu.stanford.smi.protegex.widget.contains.VerticalWidgetWrapperHolder
VerticalWidgetWrapperHolder(int, boolean) - Constructor for class edu.stanford.smi.protegex.widget.contains.VerticalWidgetWrapperHolder
VerticalWidgetWrapperHolder(int, boolean, int, int) - Constructor for class edu.stanford.smi.protegex.widget.contains.VerticalWidgetWrapperHolder
VIEW_INSTANCE_BUTTON_TOOLTIP - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
VIEW_INSTANCE_BUTTON_TOOLTIP_DEFAULT - Static variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
ViewButton - Class in edu.stanford.smi.protegex.widget.scatterbox
  Description of the class
ViewButton(ScatterboxWidget, ScatterboxTable, ScatterboxTableModel, KBQueryUtils) - Constructor for class edu.stanford.smi.protegex.widget.scatterbox.ViewButton
ViewConfigurationPanel - Class in edu.stanford.smi.protegex.widget.graph
ViewConfigurationPanel(Cls, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.ViewConfigurationPanel
viewObject() - Method in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
viewObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClassSelectWidget
viewObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.ClsSlotValueWidget
viewObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.InstanceSlotValueWidget
viewObject() - Method in class edu.stanford.smi.protegex.queries_tab.toolbox.SlotSelectWidget
ViewProperties - Class in edu.stanford.smi.protegex.widget.graph
ViewProperties(String, PropertyList) - Constructor for class edu.stanford.smi.protegex.widget.graph.ViewProperties
visible - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
VisibleSlotDescription - Class in edu.stanford.smi.protegex.widget.instancetable
  Wrapper around all the information that describes how a slot appears.
VisibleSlotDescription(KnowledgeBase, PropertyList, String) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
VisibleSlotDescription(Slot) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription
VisibleSlotDescription(Slot, Color, String, int) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription

## W

WarningsConfigurationPanel - Class in edu.stanford.smi.protegex.widget.instancetable
  Description of the Class
WarningsConfigurationPanel(InstanceTableWidget) - Constructor for class edu.stanford.smi.protegex.widget.instancetable.WarningsConfigurationPanel
WidgetBox - Class in edu.stanford.smi.protegex.widget.contains
  Holds all the widget wrappers
WidgetBox(WidgetBoxLayoutManager, int, boolean) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetBox
WidgetBoxLayoutManager - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
WidgetBoxLayoutManager() - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
WidgetSeparator - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
WidgetSeparator(int) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetSeparator
WidgetWrapper - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
WidgetWrapper(Project, Instance, WidgetWrapperPool, FormDescription) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapper
WidgetWrapperActionListener - Interface in edu.stanford.smi.protegex.widget.contains
  Description of the Interface
WidgetWrapperActionProcessor - Interface in edu.stanford.smi.protegex.widget.contains
  Description of the Interface
WidgetWrapperActionProcessorImpl - Class in edu.stanford.smi.protegex.widget.contains
  Description of the class
WidgetWrapperActionProcessorImpl() - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionProcessorImpl
widgetWrapperHadActivity(WidgetWrapper) - Method in class edu.stanford.smi.protegex.widget.contains.ContainsWidget
widgetWrapperHadActivity(WidgetWrapper) - Method in interface edu.stanford.smi.protegex.widget.contains.WidgetWrapperActionListener
WidgetWrapperHolder - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
WidgetWrapperHolder() - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
WidgetWrapperHolder(int, boolean) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
WidgetWrapperHolder(int, boolean, int, int) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
WidgetWrapperPool - Class in edu.stanford.smi.protegex.widget.contains
  Description of the Class
WidgetWrapperPool(Project, KnowledgeBase, Cls, int, int, Class) - Constructor for class edu.stanford.smi.protegex.widget.contains.WidgetWrapperPool
WIDTH - Static variable in interface edu.stanford.smi.protegex.queries_tab.SlotValueWidget
writeToPropertyList(PropertyList) - Method in class edu.stanford.smi.protegex.util.ObjectStorer
writeToPropertyList(PropertyList, Object) - Static method in class edu.stanford.smi.protegex.util.ObjectStorer
writeToPropertyList(PropertyList) - Method in class edu.stanford.smi.protegex.widget.instancetable.VisibleSlotDescription

## _

_activeWidgetWrapper - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_addInstanceButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_addInstanceDialogTitle - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_addInstancePanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_bounds - Variable in class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
_broadcaster - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_buttonRelatedWidgetState - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_colorsToRectangles - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_container - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_createInstanceButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_createInstanceDialogTitle - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_createInstancePanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_currentContainer - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
_currentlyDraggingOverColumn - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_currentlyDraggingOverRow - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_defaultBorder - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_deleteInstanceButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_deleteInstancePanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_description - Static variable in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
_dialogTitleForSelectingClasses - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
_dialogTitleForSelectingInstances - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
_displayAddInstanceButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayCreateInstanceButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayDeleteInstanceButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayMoveInstanceButtons - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayPrototypeButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayRemoveInstanceButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_displayTable - Variable in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
_displayViewInstanceButton - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_divisor - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetSeparator
_domainClsListener - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_editInPlace - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
_editor - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
_elements - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_entries - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_entryCls - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
_flavor - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
_hasModelBeenConfigured - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_horizontalOrder - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_horizontalScrollIncrement - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_instance - Variable in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
_instance - Variable in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
_instance - Variable in class edu.stanford.smi.protegex.widget.contains.FormDescription
_isCurrentlyDragging - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_kb - Variable in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
_kb - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_layoutManager - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_listeners - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanelEventSupport
_logicalRectanglesToCoordinateRectangles - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_mainComponent - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_mainPanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_mapping - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_model - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTable
_model - Variable in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
_model - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_model - Variable in class edu.stanford.smi.protegex.widget.abstracttable.SymbolEditor
_model - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_model - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_moveInstanceButtonsTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_name - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_numberOfElements - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_onScreenComponent - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_outsideScrollPane - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
_outsideScrollPaneHeight - Variable in class edu.stanford.smi.protegex.widget.contains.VerticalWidgetBoxLayoutManager
_outsideScrollPaneWidth - Variable in class edu.stanford.smi.protegex.widget.contains.HorizontalWidgetBoxLayoutManager
_parentComponent - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
_processingSelection - Variable in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
_processingUserSelection - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_project - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_project - Variable in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
_project - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_properties - Variable in class edu.stanford.smi.protegex.util.AbstractWidgetState
_prototypeButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_prototypeDepth - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_prototypeInstancePanel - Variable in class edu.stanford.smi.protegex.util.SixButtonsConfigurationPanel
_queryUtilsObject - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_queryUtilsObject - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_queryUtilsObject - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
_queryUtilsObject - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_readingFromModel - Variable in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
_removeInstanceButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_removeInstancePanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_scatterboxTableModel - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxTable
_scrollPaneAroundWidgetBox - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_selection - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_selectionBorder - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_selectionObservers - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_selectionRectangle - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_slot - Variable in class edu.stanford.smi.protegex.widget.abstracttable.ComboBoxEditor
_slot - Variable in class edu.stanford.smi.protegex.widget.abstracttable.TextFieldEditor
_slot - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_spacerSize - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_state - Variable in class edu.stanford.smi.protegex.util.AbstractWidgetConfigurationPanel
_state - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetConfigurationSubPanel
_state - Variable in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
_state - Variable in class edu.stanford.smi.protegex.widget.imagemap.ImageMapPanel
_state - Variable in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
_state - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_state - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_table - Variable in class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
_table - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_table - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_tableModel - Variable in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
_text - Variable in class edu.stanford.smi.protegex.widget.scatterbox.AbstractTextPanel
_underlyingTable - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
_useDialogToSelectClasses - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
_useDialogToSelectInstances - Variable in class edu.stanford.smi.protegex.widget.abstracttable.AbstractTableWidgetState
_useSeparators - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_validator - Variable in class edu.stanford.smi.protegex.queries_tab.AbstractSlotValueWidget
_value - Variable in class edu.stanford.smi.protegex.widget.abstracttable.BooleanEditor
_value - Variable in class edu.stanford.smi.protegex.widget.abstracttable.FrameEditor
_values - Variable in class edu.stanford.smi.protegex.widget.instancetable.InstanceTableWidget
_verticalOrder - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxWidget
_verticalScrollIncrement - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_viewInstanceButtonTooltip - Variable in class edu.stanford.smi.protegex.util.ButtonRelatedWidgetState
_viewInstancePanel - Variable in class edu.stanford.smi.protegex.util.FourButtonsConfigurationPanel
_viewport - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_widget - Variable in class edu.stanford.smi.protegex.widget.contains.ContainsWidget_AbstractAction
_widget - Variable in class edu.stanford.smi.protegex.widget.instancetable.Action_AbstractTableListener
_widget - Variable in class edu.stanford.smi.protegex.widget.scatterbox.BasicOrder
_widget - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxAction
_widget - Variable in class edu.stanford.smi.protegex.widget.scatterbox.ScatterboxDNDObject
_widgetActionProcessor - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_widgetBox - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetWrapperHolder
_widgetBoxSize - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
_widgetListener - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_widgetSeparators - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox
_widgetSeparators - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBoxLayoutManager
_widgetWrappers - Variable in class edu.stanford.smi.protegex.widget.contains.WidgetBox

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