A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

A

abort() - Method in class edu.stanford.smi.protege.util.ExclusiveRunnable

Sets the aborted flag for the current runnable.

abortCompleteCache() - Method in class edu.stanford.smi.protege.server.update.DeferredOperationCache

abortCompleteCache() - Method in interface edu.stanford.smi.protege.util.transaction.cache.Cache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.InvalidatableCache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadCommittedCache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadUncommittedCache

abortCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.RepeatableReadCache

ABOUT_APPLICATION_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ABOUT_PLUGINS_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

AboutBox - Class in edu.stanford.smi.protege.ui

Panel to display for the "About Box" menu item.

AboutBox(URL, Dimension) - Constructor for class edu.stanford.smi.protege.ui.AboutBox

AboutPluginsBox - Class in edu.stanford.smi.protege.ui

AboutPluginsBox() - Constructor for class edu.stanford.smi.protege.ui.AboutPluginsBox

ABSTRACT - Static variable in class edu.stanford.smi.protege.model.RoleConstraint

ABSTRACT - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ABSTRACT_MODE - Static variable in class edu.stanford.smi.protege.code.generator.wrapping.ProjectBasedJavaCodeGeneratorOptions

AbstractBackendExportPlugin - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

AbstractBackendExportPlugin(String) - Constructor for class edu.stanford.smi.protege.plugin.AbstractBackendExportPlugin

AbstractClsWidget - Class in edu.stanford.smi.protege.widget

Base class for all ClsWidgets.

AbstractClsWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractClsWidget

AbstractCreateProjectPlugin - Class in edu.stanford.smi.protege.plugin

AbstractCreateProjectPlugin(String) - Constructor for class edu.stanford.smi.protege.plugin.AbstractCreateProjectPlugin

AbstractDatabaseFrameDb - Class in edu.stanford.smi.protege.storage.database

AbstractDatabaseFrameDb() - Constructor for class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

AbstractEvent - Class in edu.stanford.smi.protege.util

Base class for all events.

AbstractEvent(Object, int) - Constructor for class edu.stanford.smi.protege.util.AbstractEvent

AbstractEvent(Object, int, Object) - Constructor for class edu.stanford.smi.protege.util.AbstractEvent

AbstractEvent(Object, int, Object, Object) - Constructor for class edu.stanford.smi.protege.util.AbstractEvent

AbstractEvent(Object, int, Object, Object, Object) - Constructor for class edu.stanford.smi.protege.util.AbstractEvent

AbstractExportPlugin - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

AbstractExportPlugin(String) - Constructor for class edu.stanford.smi.protege.plugin.AbstractExportPlugin

AbstractFacetConstraint - Class in edu.stanford.smi.protege.model

Base class for implementions of FacetConstraint.

AbstractFacetConstraint() - Constructor for class edu.stanford.smi.protege.model.AbstractFacetConstraint

AbstractFormatter - Class in edu.stanford.smi.protege.util

TODO Class Comment

AbstractFormatter() - Constructor for class edu.stanford.smi.protege.util.AbstractFormatter

AbstractFrameStore - Class in edu.stanford.smi.protege.model.framestore

AbstractFrameStore(String) - Constructor for class edu.stanford.smi.protege.model.framestore.AbstractFrameStore

AbstractFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.AbstractFrameStore

AbstractFrameStoreInvocationHandler - Class in edu.stanford.smi.protege.model.framestore

AbstractFrameStoreInvocationHandler() - Constructor for class edu.stanford.smi.protege.model.framestore.AbstractFrameStoreInvocationHandler

AbstractImportExportSpecification - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

AbstractImportExportSpecification(Plugin, String) - Constructor for class edu.stanford.smi.protege.plugin.AbstractImportExportSpecification

AbstractKnowledgeBaseFactory - Class in edu.stanford.smi.protege.model

AbstractKnowledgeBaseFactory() - Constructor for class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

AbstractListWidget - Class in edu.stanford.smi.protege.widget

Common functionality for widgets which are composed of a list box in a labeled component

AbstractListWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractListWidget

AbstractPlugin - Class in edu.stanford.smi.protege.plugin

AbstractPlugin() - Constructor for class edu.stanford.smi.protege.plugin.AbstractPlugin

AbstractProjectPlugin - Class in edu.stanford.smi.protege.plugin

AbstractProjectPlugin() - Constructor for class edu.stanford.smi.protege.plugin.AbstractProjectPlugin

AbstractRefreshableServerPanel - Class in edu.stanford.smi.protege.server.admin

AbstractRefreshableServerPanel(RemoteServer, RemoteSession) - Constructor for class edu.stanford.smi.protege.server.admin.AbstractRefreshableServerPanel

AbstractSelectableComponent - Class in edu.stanford.smi.protege.util

Base class implementation for the Selectable interface.

AbstractSelectableComponent() - Constructor for class edu.stanford.smi.protege.util.AbstractSelectableComponent

AbstractSlotWidget - Class in edu.stanford.smi.protege.widget

Base class for all SlotWidgets.

AbstractSlotWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractSlotWidget

AbstractTableWidget - Class in edu.stanford.smi.protege.widget

Base class for all widgets which are predominately a JTable.

AbstractTableWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractTableWidget

AbstractTabWidget - Class in edu.stanford.smi.protege.widget

Base class for all TabWidgets.

AbstractTabWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractTabWidget

AbstractTreeWidget - Class in edu.stanford.smi.protege.widget

Convenience base class for slot widgets that contain a JTree.

AbstractTreeWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractTreeWidget

AbstractValidatableComponent - Class in edu.stanford.smi.protege.util

Base class to match up the Validatable interface to a swing JComponent

AbstractValidatableComponent() - Constructor for class edu.stanford.smi.protege.util.AbstractValidatableComponent

AbstractWidget - Class in edu.stanford.smi.protege.widget

Abstract class that implements many of the common "widget" methods.

AbstractWidget() - Constructor for class edu.stanford.smi.protege.widget.AbstractWidget

AbstractWrappedInstance - Class in edu.stanford.smi.protege.code.generator.wrapping

AbstractWrappedInstance(Instance) - Constructor for class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

AbstractWrappedInstance() - Constructor for class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

accept() - Method in class edu.stanford.smi.protege.server.util.ZipServerSocket

accept(File) - Method in class edu.stanford.smi.protege.util.ExtensionFilter

ACCESS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

accessFacet(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ArchiveProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.AutosynchronizeTrees

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.BrowseForFile

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.BuildProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.CascadeWindows

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ChangeIncludedProjects

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ChangeProjectStorageFormat

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.Clear

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.CloseAllWindows

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.CloseCurrentView

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.CloseProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ConfigureArchive

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ConfigureProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ConvertUnicodeSequenceAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.Copy

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.CreateProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.Cut

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.DecreaseFontSize

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.DetachCurrentView

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.DisplayHtml

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ExitApplication

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ExportPluginAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ExportToCsvAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ImportPluginAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.IncludeProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.IncreaseFontSize

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.InsertUnicodeCharacterAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.JFrameToFront

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.LookAndFeelAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.MakeCopiesAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ManageIncludedProjectsAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.MergeIncludedProjects

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.OpenProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.OpenRemoteProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.Paste

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.PlasticLookAndFeelAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.RedoAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ReferencersAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.RevertProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.SaveProject

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.SaveProjectAs

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.SaveProjectToFormat

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.SetPreferences

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowAboutBox

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowAboutPluginsBox

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowCommandHistoryAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowEncodingAndLocales

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowIconDialog

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowIncludedProjects

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.ShowMetrics

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.SynchronizeTrees

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.action.UndoAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGeneratorAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.ui.ConfigureAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.AddAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.CreateAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.DeleteAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.RemoveAction

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.SwitchableActionListener

actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.util.ViewAction

add(String, Class<?>, Class<?>) - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

add(Command) - Method in class edu.stanford.smi.protege.model.framestore.undo.MacroCommand

add(JMenu) - Method in class edu.stanford.smi.protege.ui.ProjectMenuBar

add(int, Object) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Inserts the specified element at the specified position in this list.

add(Object) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Appends the specified element to the end of this list.

add(Object, EventListener) - Method in class edu.stanford.smi.protege.util.ListenerCollection

add_escapes(String) - Method in exception edu.stanford.smi.protege.storage.clips.ParseException

Used to convert raw characters to their escaped version when these raw version cannot be used as part of an ASCII string literal.

AddAction - Class in edu.stanford.smi.protege.util

Base class support for the "Add" action available on most widgets.

AddAction(ResourceKey) - Constructor for class edu.stanford.smi.protege.util.AddAction

AddAction(String) - Constructor for class edu.stanford.smi.protege.util.AddAction

AddAction(String, Icon) - Constructor for class edu.stanford.smi.protege.util.AddAction

addActionListener(ActionListener) - Method in class edu.stanford.smi.protege.util.IntegerField

addActiveChildFrameStore(NarrowFrameStore, String) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

addActiveFrameStore(NarrowFrameStore) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

addActiveFrameStore(NarrowFrameStore, Collection) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

addAll(int, Collection) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Inserts all of the elements in the specified collection into this list, starting at the specified position.

addAll(Collection) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Appends all of the elements in the specified collection to the end of this list, in the order that they are returned by the specified collection's iterator.

addAllowedGroupOperations(GroupOperation) - Method in class edu.stanford.smi.protege.server.metaproject.impl.PolicyControlledObjectImpl

addAllowedGroupOperations(GroupOperation) - Method in interface edu.stanford.smi.protege.server.metaproject.PolicyControlledObject

addAllowedOperation(Operation) - Method in interface edu.stanford.smi.protege.server.metaproject.GroupOperation

addAllowedOperation(Operation) - Method in class edu.stanford.smi.protege.server.metaproject.impl.GroupOperationImpl

addButton(Action) - Method in class edu.stanford.smi.protege.ui.HeaderComponent

addButton(Action) - Method in class edu.stanford.smi.protege.ui.ProjectToolBar

addButton(String) - Method in class edu.stanford.smi.protege.ui.ViewSelector

addButton(Action) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

addButton(Action, boolean) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

addButton(Action) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

addButton(Action, boolean) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

addButton(Action) - Method in class edu.stanford.smi.protege.widget.AbstractTreeWidget

addButton(String, String, boolean) - Method in class edu.stanford.smi.protege.widget.ButtonConfigurationPanel

addButton(LabeledComponent, Action) - Method in class edu.stanford.smi.protege.widget.ClsFieldWidget

addButton(LabeledComponent, Action, boolean) - Method in class edu.stanford.smi.protege.widget.InstanceFieldWidget

addButtonConfiguration(Action) - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

addButtonConfiguration(Action, boolean) - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

addButtonForExistingTab(WidgetDescriptor) - Method in class edu.stanford.smi.protege.ui.ViewSelector

addButtons(Action, LabeledComponent) - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

addButtons(LabeledComponent) - Method in class edu.stanford.smi.protege.ui.SubslotPane

addButtons(LabeledComponent) - Method in class edu.stanford.smi.protege.widget.ClsFieldWidget

addButtons(LabeledComponent, Action) - Method in class edu.stanford.smi.protege.widget.ClsListWidget

addButtons(LabeledComponent) - Method in class edu.stanford.smi.protege.widget.InstanceFieldWidget

addButtons(LabeledComponent) - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

addChangeListener(ChangeListener) - Method in interface edu.stanford.smi.protege.model.CommandManager

addChangeListener(ChangeListener) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

addChangeListener(ChangeListener) - Method in class edu.stanford.smi.protege.ui.ProjectView

addChangeListener(ChangeListener) - Method in class edu.stanford.smi.protege.util.FileField

addChangeListener(ChangeListener) - Method in class edu.stanford.smi.protege.util.URIField

addCheckBoxMenuItem(JMenu, Action, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addChild(X, X) - Method in class edu.stanford.smi.protege.util.Tree

addCls(Cls, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addClsListener(ClsListener) - Method in interface edu.stanford.smi.protege.model.Cls

addClsListener(ClsListener) - Method in class edu.stanford.smi.protege.model.DefaultCls

addClsListener(ClsListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addClsListener(Cls, ClsListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addClsListener(ClsListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Add a listener for class events for all classes

addClsListener(Cls, ClsListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Add a listener for class events for a particular class

addColumn(JTable, TableCellRenderer) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addColumn(JTable, String, TableCellRenderer) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addColumn(JTable, TableCellRenderer, TableCellEditor) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addColumn(JTable, TableCellRenderer, String, TableCellEditor) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addColumn(int, ResourceKey, TableCellRenderer) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

addCommittableUpdate(ValueUpdate) - Method in class edu.stanford.smi.protege.server.framestore.Registration

addCustomEntriesToTable(UIDefaults) - Method in class edu.stanford.smi.protege.util.ProtegePlasticTheme

addCustomEvent(AbstractEvent) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

addDeletionHook(KnowledgeBase, DeletionHook) - Static method in class edu.stanford.smi.protege.util.DeletionHookUtil

addDirectOwnSlotValue(Frame, Slot, Object) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectOwnSlotValues(Frame, Slot, Collection) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectSuperclass(Cls) - Method in interface edu.stanford.smi.protege.model.Cls

addDirectSuperclass(Cls) - Method in class edu.stanford.smi.protege.model.DefaultCls

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

addDirectSuperclass(Cls, Cls) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

addDirectSuperclass(Cls, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addDirectSuperclass(Cls, Cls) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

addDirectSuperclass(Cls, Cls, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

addDirectSuperclass(Cls, Cls, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addDirectSuperslot(Slot) - Method in class edu.stanford.smi.protege.model.DefaultSlot

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

addDirectSuperslot(Slot, Slot) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

addDirectSuperslot(Slot, Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addDirectSuperslot(Slot) - Method in interface edu.stanford.smi.protege.model.Slot

addDirectSuperslot(Slot, Slot) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

addDirectSuperslot(Slot, Slot, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

addDirectSuperslot(Slot, Slot, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

addDirectTemplateSlot(Slot) - Method in interface edu.stanford.smi.protege.model.Cls

addDirectTemplateSlot(Slot) - Method in class edu.stanford.smi.protege.model.DefaultCls

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

addDirectTemplateSlot(Cls, Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addDirectTemplateSlot(Cls, Slot) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

addDirectTemplateSlot(Cls, Slot, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

addDirectTemplateSlot(Cls, Slot, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

addDirectType(Cls) - Method in class edu.stanford.smi.protege.model.DefaultInstance

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

addDirectType(Instance, Cls) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

addDirectType(Cls) - Method in interface edu.stanford.smi.protege.model.Instance

addDirectType(Instance, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addDirectType(Instance, Cls) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

addDirectType(Instance, Cls, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

addDirectType(Instance, Cls, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

addDirectTypes(Instance, Collection) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addError(Object) - Method in interface edu.stanford.smi.protege.exception.AmalgamatedException

addError(Object) - Method in exception edu.stanford.smi.protege.exception.AmalgamatedLoadException

addErrors(Collection) - Method in interface edu.stanford.smi.protege.exception.AmalgamatedException

addErrors(Collection) - Method in exception edu.stanford.smi.protege.exception.AmalgamatedLoadException

addEscapes(String) - Static method in error edu.stanford.smi.protege.storage.clips.TokenMgrError

Replaces unprintable characters by their escaped (or unicode escaped) equivalents in the given string

addFacetListener(FacetListener) - Method in class edu.stanford.smi.protege.model.DefaultFacet

addFacetListener(Facet, FacetListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addFacetListener(FacetListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addFacetListener(FacetListener) - Method in interface edu.stanford.smi.protege.model.Facet

addFacetListener(FacetListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Add a listener for facet events for all facets

addFacetListener(Facet, FacetListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Add a listener for facet events for a particular facet

addFirst(Object) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Inserts the given element at the beginning of this list.

addFollowedExprs(Frame, Slot, List) - Method in class edu.stanford.smi.protege.server.framestore.background.FrameCalculator

addFrame(Frame) - Method in interface edu.stanford.smi.protege.model.Storage

addFrame(FrameID, Frame) - Method in class edu.stanford.smi.protege.model.SystemFrames

addFrameListener(FrameListener) - Method in class edu.stanford.smi.protege.model.DefaultFrame

addFrameListener(Frame, FrameListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addFrameListener(FrameListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addFrameListener(FrameListener) - Method in interface edu.stanford.smi.protege.model.Frame

addFrameListener(Frame, FrameListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

add a listener fro frame evnets for a particular frame

addFrameListener(FrameListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

add a listener for frame events for all frames

addGeneralTab(SlotWidget) - Method in class edu.stanford.smi.protege.widget.WidgetConfigurationPanel

addHeaderButton(Action) - Method in class edu.stanford.smi.protege.util.LabeledComponent

addHeaderButtons(LabeledComponent) - Method in class edu.stanford.smi.protege.ui.ClsInverseRelationshipPanel

addHeaderSeparator() - Method in class edu.stanford.smi.protege.util.LabeledComponent

addHeaderToggleButton(Action) - Method in class edu.stanford.smi.protege.util.LabeledComponent

addHook(DeletionHook) - Method in class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

addIcon(Icon) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

addInheritedTemplateSlots(Collection, Cls) - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

addInstance(Instance, String, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

TODO: Implement addInstance

addInstance(Instance, String, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addInstanceListener(InstanceListener) - Method in class edu.stanford.smi.protege.model.DefaultInstance

addInstanceListener(Instance, InstanceListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addInstanceListener(InstanceListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addInstanceListener(InstanceListener) - Method in interface edu.stanford.smi.protege.model.Instance

addInstanceListener(Instance, InstanceListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addInstanceListener(InstanceListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addItem(Object) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

addItem(Object) - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

addItems(Collection) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

addItems(Collection) - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

addItemsSent(int) - Method in class edu.stanford.smi.protege.server.framestore.BandWidthPolicy

addItemToWaitList() - Method in class edu.stanford.smi.protege.server.framestore.BandWidthPolicy

addJavaLoadPackage(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addJavaLoadPackage(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

This method requires some background information.

addJavaPackage(String) - Method in interface edu.stanford.smi.protege.model.FrameFactory

addJavaPackage(String) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

addJavaPackageName(String) - Method in class edu.stanford.smi.protege.model.Project

addKnowledgeBaseListener(KnowledgeBaseListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addKnowledgeBaseListener(KnowledgeBaseListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addLargeToggleToolBarButton(JToolBar, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addLargeToolBarButton(JToolBar, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addLast(Object) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Appends the given element to the end of this list.

addLayoutComponent(Component, Object) - Method in class edu.stanford.smi.protege.util.ResizingLayout

addLayoutComponent(String, Component) - Method in class edu.stanford.smi.protege.util.ResizingLayout

addListener(Class<?>, Object, EventListener) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

addListener(Class, Object, EventListener) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

addListener(Collection) - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

addListValue(JList, Object) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addListValue(JList, Object, int) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addListValue(JList, Object, Comparator) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addListValues(JList, Collection) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addMainWindowToolBarButton(Action) - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

addMember(User) - Method in interface edu.stanford.smi.protege.server.metaproject.Group

addMember(User) - Method in class edu.stanford.smi.protege.server.metaproject.impl.GroupImpl

addMenuItem(JMenu, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addMenuItemNoIcon(JMenu, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addNotify() - Method in class edu.stanford.smi.protege.ui.EditStringPanel

addNotify() - Method in class edu.stanford.smi.protege.widget.InstanceNameWidget

addNotify() - Method in class edu.stanford.smi.protege.widget.YellowStickyWidget

addOwnFacetValue(Slot, Facet, Object) - Method in class edu.stanford.smi.protege.model.DefaultFrame

addOwnFacetValue(Slot, Facet, Object) - Method in interface edu.stanford.smi.protege.model.Frame

addOwnSlotValue(Slot, Object) - Method in class edu.stanford.smi.protege.model.DefaultFrame

addOwnSlotValue(Frame, Slot, Object) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. use #addDirectOwnSlotValues

addOwnSlotValue(Slot, Object) - Method in interface edu.stanford.smi.protege.model.Frame

addOwnSlotValue(Frame, Slot, Object) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addOwnSlotValue(Frame, String, Object) - Static method in class edu.stanford.smi.protege.model.ModelUtilities

addPage(WizardPage) - Method in class edu.stanford.smi.protege.util.Wizard

addProjectListener(ProjectListener) - Method in class edu.stanford.smi.protege.model.Project

addProjectToMRUList(URI) - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

addProjectViewListener(ProjectViewListener) - Method in class edu.stanford.smi.protege.ui.ProjectView

addPropertyValue(PropertyValue) - Method in interface edu.stanford.smi.protege.server.metaproject.GroupOperation

addPropertyValue(PropertyValue) - Method in class edu.stanford.smi.protege.server.metaproject.impl.GroupOperationImpl

addPropertyValue(PropertyValue) - Method in class edu.stanford.smi.protege.server.metaproject.impl.OperationImpl

addPropertyValue(PropertyValue) - Method in class edu.stanford.smi.protege.server.metaproject.impl.UnbackedOperationImpl

Performs no operation.

addPropertyValue(PropertyValue) - Method in class edu.stanford.smi.protege.server.metaproject.impl.WrappedProtegeInstanceWithPropsImpl

addPropertyValue(String, String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.WrappedProtegeInstanceWithPropsImpl

addPropertyValue(PropertyValue) - Method in interface edu.stanford.smi.protege.server.metaproject.Operation

addPropertyValue(PropertyValue) - Method in interface edu.stanford.smi.protege.server.metaproject.PolicyControlledObject

addPropertyValue(String, String) - Method in interface edu.stanford.smi.protege.server.metaproject.PolicyControlledObject

addPropertyValue(PropertyValue) - Method in interface edu.stanford.smi.protege.server.metaproject.User

addPropertyValue(String, String) - Method in interface edu.stanford.smi.protege.server.metaproject.User

addReadUpdate(RemoteSession, Frame, SerializedCacheUpdate<RemoteSession, Sft, List>) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

addReason(CacheRequestReason) - Method in class edu.stanford.smi.protege.server.framestore.background.WorkInfo

addRefreshButton() - Method in class edu.stanford.smi.protege.server.admin.AbstractRefreshableServerPanel

addRefreshButton() - Method in class edu.stanford.smi.protege.server.admin.ControlServerPanel

addRefreshButton() - Method in class edu.stanford.smi.protege.server.admin.MetaprojectPanel

addRelation(String, String) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

addRequest(Frame, RemoteSession, CacheRequestReason) - Method in class edu.stanford.smi.protege.server.framestore.background.FrameCalculator

addRequest(Frame, RemoteSession, ServerCachedState, CacheRequestReason, boolean) - Method in class edu.stanford.smi.protege.server.framestore.background.FrameCalculator

addRow(Object) - Method in class edu.stanford.smi.protege.util.RowTableModel

addRow(String, String) - Method in class edu.stanford.smi.protege.widget.PropertiesTableModel

addRuntimeWidgets(Instance, Cls) - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

addSelectedListValue(JList, Object) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addSelectedListValues(JList, Collection) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.util.AbstractSelectableComponent

addSelectionListener(SelectionListener) - Method in interface edu.stanford.smi.protege.util.Selectable

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.util.SelectableContainer

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.util.SelectableList

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.util.SelectableTable

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.util.SelectableTree

addSelectionListener(SelectionListener) - Method in class edu.stanford.smi.protege.widget.AbstractWidget

addServerProjectListener(ServerProjectListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addServerProjectListener(ServerProjectListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addSlot(Slot, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addSlotListener(Slot, SlotListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addSlotListener(SlotListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addSlotListener(SlotListener) - Method in class edu.stanford.smi.protege.model.DefaultSlot

addSlotListener(Slot, SlotListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addSlotListener(SlotListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addSlotListener(SlotListener) - Method in interface edu.stanford.smi.protege.model.Slot

addSlotValue(Slot, Object) - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

addSlotValue(MetaProjectImpl.SlotEnum, Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.WrappedProtegeInstanceImpl

addState(ServerCachedState) - Method in class edu.stanford.smi.protege.server.framestore.background.WorkInfo

addSubmenu(JMenu, JMenu) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addSystemFrames() - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

addSystemFrames(FrameStore) - Method in class edu.stanford.smi.protege.model.SystemFrames

addTab(WidgetDescriptor, int) - Method in class edu.stanford.smi.protege.ui.ProjectView

addTab(WidgetDescriptor) - Method in class edu.stanford.smi.protege.ui.ProjectView

addTab(String, Component) - Method in class edu.stanford.smi.protege.util.ValidatableTabComponent

addTab(String, Component, String) - Method in class edu.stanford.smi.protege.util.ValidatableTabComponent

addTab(String, Icon, Component, String) - Method in class edu.stanford.smi.protege.util.ValidatableTabComponent

addTemplateFacetValue(Slot, Facet, Object) - Method in interface edu.stanford.smi.protege.model.Cls

addTemplateFacetValue(Slot, Facet, Object) - Method in class edu.stanford.smi.protege.model.DefaultCls

addTemplateFacetValue(Cls, Slot, Facet, Object) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. use #setDirectTemplateFacetValues

addTemplateFacetValue(Cls, Slot, Facet, Object) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addTemplateSlots(Collection, Cls) - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

addTemplateSlotValue(Slot, Object) - Method in interface edu.stanford.smi.protege.model.Cls

addTemplateSlotValue(Slot, Object) - Method in class edu.stanford.smi.protege.model.DefaultCls

addTemplateSlotValue(Cls, Slot, Object) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. use #setDirectTemplateSlotValues

addTemplateSlotValue(Cls, Slot, Object) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addText(String) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

addToggleButton(Action) - Method in class edu.stanford.smi.protege.ui.HeaderComponent

addToggleButton(Action) - Method in class edu.stanford.smi.protege.ui.ProjectToolBar

addToggleToolBarButton(JToolBar, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addToggleToolBarButton(JToolBar, Action, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addToolBarButton(JToolBar, Action, AbstractButton) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addToolBarButton(JToolBar, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addToolBarButton(JToolBar, Action, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

addTransactionListener(TransactionListener) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

addTransactionListener(TransactionListener) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

addUniqueListValues(JList, Collection) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

addUniqueListValues(Collection) - Method in class edu.stanford.smi.protege.widget.InstanceValuesComponent

addUpdate(ValueUpdate) - Method in class edu.stanford.smi.protege.server.framestore.Registration

addUserToolBar(JToolBar) - Method in class edu.stanford.smi.protege.ui.ProjectManager

addUserToolBar(JToolBar) - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

addValue(Frame, Slot, Facet, boolean, Object) - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

addValue(Object) - Method in class edu.stanford.smi.protege.model.framestore.Record

addValue(Frame, Slot, Facet, boolean, Object) - Method in interface edu.stanford.smi.protege.model.Storage

addValue(Frame, Slot, Facet, boolean, Object, int) - Method in interface edu.stanford.smi.protege.model.Storage

addValue(X, Y) - Method in class edu.stanford.smi.protege.util.MultiMap

addValue(Object) - Method in class edu.stanford.smi.protege.util.SimpleListModel

addValue(Object, int) - Method in class edu.stanford.smi.protege.util.SimpleListModel

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection, RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection, RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

addValues(Frame, Slot, Facet, boolean, Collection) - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

addValues(X, Collection<Y>) - Method in class edu.stanford.smi.protege.util.MultiMap

addValues(Collection) - Method in class edu.stanford.smi.protege.util.SimpleListModel

addWidgetListener(WidgetListener) - Method in class edu.stanford.smi.protege.widget.AbstractClsWidget

addWidgetListener(WidgetListener) - Method in interface edu.stanford.smi.protege.widget.ClsWidget

adjustBeginLineColumn(int, int) - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Method to adjust line and column numbers for the start of a token.

adjustForClient() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

adjustForServer() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

adjustFrameId(FrameID) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

afterCreate(Project) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called after a new project is created but before it is displayed

afterCreate(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

afterCreate(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

afterLoad(Project) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called after an existing project is loaded but before it is displayed

afterLoad(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

afterLoad(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

afterSave(Project) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called after a project has been saved.

afterSave(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

afterSave(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

afterShow(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.code.generator.wrapping.CodeGeneratorProjectPlugin

afterShow(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called after the view has been added to the screen

afterShow(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

afterShow(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

ALIGNMENT - Static variable in class edu.stanford.smi.protege.server.socket.deflate.PacketHeader

AllowableAction - Class in edu.stanford.smi.protege.util

Base class for actions that supports two features: (1) listening to a Selectableand only enabling if a selection is made, and (2) being disablable manually.

AllowableAction(ResourceKey) - Constructor for class edu.stanford.smi.protege.util.AllowableAction

AllowableAction(ResourceKey, Selectable) - Constructor for class edu.stanford.smi.protege.util.AllowableAction

AllowableAction(String, Selectable) - Constructor for class edu.stanford.smi.protege.util.AllowableAction

AllowableAction(String, Icon, Selectable) - Constructor for class edu.stanford.smi.protege.util.AllowableAction

AllowableAction(String, String, Icon, Selectable) - Constructor for class edu.stanford.smi.protege.util.AllowableAction

allowDelegation() - Method in interface edu.stanford.smi.protege.server.RemoteSession

allowDelegation() - Method in class edu.stanford.smi.protege.server.Session

ALLOWED_CLASSES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ALLOWED_CLASSES - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_FLOATS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_GRAMMAR - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_INTEGERS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_PARENTS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_STRINGS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_SUPERCLASSES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ALLOWED_SYMBOLS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ALLOWED_VALUES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ALLOWED_VALUES - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

allowedClassesValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedConstantValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedConstantValueDescriptionExtension(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedFloatsValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedGrammarValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedIntegersValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedParentsValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedStringsValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedSymbolsValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowedValuesValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

allowsCreateUsers() - Method in interface edu.stanford.smi.protege.server.RemoteServer

allowsCreateUsers() - Method in class edu.stanford.smi.protege.server.Server

allowsMultipleValues(Integer) - Static method in class edu.stanford.smi.protege.model.MaximumCardinalityConstraint

allowsMultipleValues() - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

AmalgamatedException - Interface in edu.stanford.smi.protege.exception

AmalgamatedLoadException - Exception in edu.stanford.smi.protege.exception

AmalgamatedLoadException(Collection) - Constructor for exception edu.stanford.smi.protege.exception.AmalgamatedLoadException

ANNOTATED_INSTANCE - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

ANNOTATED_INSTANCE - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

ANNOTATION - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

ANNOTATION - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

ANNOTATION_TEXT - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

ANNOTATION_TEXT - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

ANY - Static variable in class edu.stanford.smi.protege.model.ValueType

ANY - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

appendIcon(Icon) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

appendText(String) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

Applet - Class in edu.stanford.smi.protege

Class to allow Protege to run as an applet.

Applet() - Constructor for class edu.stanford.smi.protege.Applet

Application - Class in edu.stanford.smi.protege

Main class for the Protege application (as opposed to an applet).

Application() - Constructor for class edu.stanford.smi.protege.Application

APPLICATION_EXIT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

APPLICATION_INSTALL_DIRECTORY - Static variable in class edu.stanford.smi.protege.util.ApplicationProperties

APPLICATION_PREFERENCES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ApplicationProperties - Class in edu.stanford.smi.protege.util

Utility class for accessing system properties and properties from the application properties file.

ApplicationProperties() - Constructor for class edu.stanford.smi.protege.util.ApplicationProperties

apply(Collection<? extends X>, UnaryFunction<X, Y>) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

apply(Component, UnaryFunction) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

apply(X) - Method in interface edu.stanford.smi.protege.util.UnaryFunction

apply(Object) - Method in interface edu.stanford.smi.protege.util.UnaryPredicate

APPLY_TO_TRAILER_STRING - Static variable in class edu.stanford.smi.protege.model.Transaction

applyToDescendents(Component, UnaryFunction) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

archive(Project, String) - Method in class edu.stanford.smi.protege.util.ArchiveManager

ARCHIVE_FAILED_DIALOG_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ArchiveManager - Class in edu.stanford.smi.protege.util

ArchivePanel - Class in edu.stanford.smi.protege.ui

ArchivePanel() - Constructor for class edu.stanford.smi.protege.ui.ArchivePanel

ArchiveProject - Class in edu.stanford.smi.protege.action

ArchiveProject(boolean) - Constructor for class edu.stanford.smi.protege.action.ArchiveProject

archiveProjectRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

ArchiveRecord - Class in edu.stanford.smi.protege.util

ArchiveRecord(File, String) - Constructor for class edu.stanford.smi.protege.util.ArchiveRecord

areDirectValues(Collection) - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

areValidOwnSlotValues(Slot, Collection) - Method in class edu.stanford.smi.protege.model.DefaultFrame

areValidOwnSlotValues(Frame, Slot, Collection) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

areValidOwnSlotValues(Slot, Collection) - Method in interface edu.stanford.smi.protege.model.Frame

areValidOwnSlotValues(Frame, Slot, Collection) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

areValidValues(Frame, Slot, Collection, Collection) - Method in class edu.stanford.smi.protege.model.AbstractFacetConstraint

areValidValues(Frame, Slot, Collection) - Method in class edu.stanford.smi.protege.model.DefaultFacet

areValidValues(Frame, Slot, Collection) - Method in interface edu.stanford.smi.protege.model.Facet

areValidValues(Frame, Slot, Collection, Collection) - Method in interface edu.stanford.smi.protege.model.FacetConstraint

ArgumentCheckingFrameStore - Class in edu.stanford.smi.protege.model.framestore

ArgumentCheckingFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

ArrayListMultiMap<X,Y> - Class in edu.stanford.smi.protege.util

Multimap implementation where the value collection is a set.

ArrayListMultiMap() - Constructor for class edu.stanford.smi.protege.util.ArrayListMultiMap

ArrayListMultiMap(int) - Constructor for class edu.stanford.smi.protege.util.ArrayListMultiMap

as(Class<? extends X>) - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

as(Object, Class<? extends X>) - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

Assert - Class in edu.stanford.smi.protege.util

A utility class for checking assertions.

Assert() - Constructor for class edu.stanford.smi.protege.util.Assert

assertEquals(float, float, float) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(String, float, float, float) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(double, double, double) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(String, double, double, double) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(int, int) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(String, int, int) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(long, long) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(String, long, long) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(Object, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertEquals(String, Object, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertFalse(boolean) - Static method in class edu.stanford.smi.protege.util.Assert

assertFalse(String, boolean) - Static method in class edu.stanford.smi.protege.util.Assert

assertFrameName() - Method in class edu.stanford.smi.protege.model.DefaultFrame

assertFrameName(Frame) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

assertFrameName() - Method in interface edu.stanford.smi.protege.model.Frame

This call ensures that the name slot for the frame has the frame name as its value.

assertFrameName(Frame) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

assertNotNull(Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertNotNull(String, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertNull(Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertNull(String, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertSame(Object, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertSame(String, Object, Object) - Static method in class edu.stanford.smi.protege.util.Assert

assertTrue(boolean) - Static method in class edu.stanford.smi.protege.util.Assert

assertTrue(String, boolean) - Static method in class edu.stanford.smi.protege.util.Assert

assertTypeAndName(FrameStore, Frame, Collection<Cls>) - Method in class edu.stanford.smi.protege.model.SystemFrames

ASSOCIATED_FACET - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

ASSOCIATED_FACET - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

ASSOCIATED_FACET - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ASSOCIATED_SLOT - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

ASSOCIATED_SLOT - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

associatedFacet(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

AT_LEAST_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

AT_MOST_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

attemptClose(int) - Method in class edu.stanford.smi.protege.util.ModalDialog

attemptDialogClose(int) - Static method in class edu.stanford.smi.protege.util.ModalDialog

attemptSave() - Method in class edu.stanford.smi.protege.ui.ProjectView

autoscroll(Point) - Method in class edu.stanford.smi.protege.util.SelectableTree

AUTOSYNCHRONIZE_CLASS_TREES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

AutosynchronizeTrees - Class in edu.stanford.smi.protege.action

AutosynchronizeTrees() - Constructor for class edu.stanford.smi.protege.action.AutosynchronizeTrees

B

backup(int) - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Backup a number of characters.

BANDWIDTH_CAP_PROPERTY - Static variable in class edu.stanford.smi.protege.server.framestore.BandWidthPolicy

BandWidthPolicy - Class in edu.stanford.smi.protege.server.framestore

BandWidthPolicy() - Constructor for class edu.stanford.smi.protege.server.framestore.BandWidthPolicy

BandWidthPolicy(int, int) - Constructor for class edu.stanford.smi.protege.server.framestore.BandWidthPolicy

BASE - Static variable in interface edu.stanford.smi.protege.event.ServerProjectEvent

BASE_FRAME_TYPE_VALUE - Static variable in class edu.stanford.smi.protege.storage.database.DatabaseUtils

BasicCache<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.impl

This is a basic cache that - ignores the impact of transactions on the cache.

BasicCache() - Constructor for class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

beep() - Static method in class edu.stanford.smi.protege.util.SystemUtilities

beforeClose(Project) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called before the close operation for a project

beforeClose(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

beforeClose(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

beforeHide(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.code.generator.wrapping.CodeGeneratorProjectPlugin

beforeHide(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Call before the view has been removed from the screen

beforeHide(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

beforeHide(ProjectView, ProjectToolBar, ProjectMenuBar) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

beforeProjectSessionClosed(ServerProjectSessionClosedEvent) - Method in class edu.stanford.smi.protege.event.ServerProjectAdapter

beforeProjectSessionClosed(ServerProjectSessionClosedEvent) - Method in interface edu.stanford.smi.protege.event.ServerProjectListener

beforeSave(Project) - Method in interface edu.stanford.smi.protege.plugin.ProjectPlugin

Called before a save operation for a project

beforeSave(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginAdapter

beforeSave(Project) - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

beginBatch() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

beginColumn - Variable in class edu.stanford.smi.protege.storage.clips.Token

The column number of the first character of this Token.

beginLine - Variable in class edu.stanford.smi.protege.storage.clips.Token

The line number of the first character of this Token.

BeginToken() - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Start.

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

beginTransaction(String, String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

beginTransaction(String) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

beginTransaction(String, String) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

beginTransaction(String) - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.TransactionFrameStore

beginTransaction(String) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

beginTransaction(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Tells the system that one or more edit actions will follow which should be handled as a unit for undo.

beginTransaction(String, String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

beginTransaction() - Method in interface edu.stanford.smi.protege.model.Storage

beginTransaction(String) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

beginTransaction(String, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

beginTransaction(String, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

beginTransaction(String, RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

beginTransaction(String, RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

beginTransaction(RemoteSession) - Method in class edu.stanford.smi.protege.server.update.DeferredOperationCache

beginTransaction(String) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

beginTransaction(String) - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

beginTransaction(String) - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

beginTransaction() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

beginTransaction(String) - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

beginTransaction(S) - Method in interface edu.stanford.smi.protege.util.transaction.cache.Cache

The session has entered a transaction.

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.InvalidatableCache

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadCommittedCache

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadUncommittedCache

beginTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.RepeatableReadCache

beginTransaction() - Method in class edu.stanford.smi.protege.util.transaction.TransactionMonitor

beginTransaction(String) - Method in class edu.stanford.smi.protege.widget.AbstractWidget

beginTransaction(String, String) - Method in class edu.stanford.smi.protege.widget.AbstractWidget

bindName() - Method in class edu.stanford.smi.protege.server.Server

BLANK_COMMENT - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

BOOLEAN - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

BOOLEAN - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

BOOLEAN - Static variable in class edu.stanford.smi.protege.model.ValueType

BOOLEAN_TYPE - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.AttributeValue

BooleanListWidget - Class in edu.stanford.smi.protege.widget

Slot widget for acquiring a list of booleans.

BooleanListWidget() - Constructor for class edu.stanford.smi.protege.widget.BooleanListWidget

BRA - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

bringErrorFrameToFront() - Method in class edu.stanford.smi.protege.ui.ProjectManager

browse() - Method in class edu.stanford.smi.protege.util.FileField

browse() - Method in class edu.stanford.smi.protege.util.URIField

BrowseForFile - Class in edu.stanford.smi.protege.action

Action to bring up a file chooser dialog and pick a file.

BrowseForFile(JComponent, String) - Constructor for class edu.stanford.smi.protege.action.BrowseForFile

BrowseForFile(JComponent, String, String) - Constructor for class edu.stanford.smi.protege.action.BrowseForFile

BROWSER - Static variable in class edu.stanford.smi.protege.util.ApplicationProperties

BROWSER_TEXT_CHANGED - Static variable in class edu.stanford.smi.protege.event.FrameEvent

BrowserComparator - Class in edu.stanford.smi.protege.ui

Comparator for browser key text for two frames.

BrowserComparator() - Constructor for class edu.stanford.smi.protege.ui.BrowserComparator

BrowserLauncher - Class in edu.stanford.smi.protege.util

BrowserLauncher is a class that provides one static method, openURL, which opens the default web browser for the current user of the system to the given URL.

BrowserSlotPattern - Class in edu.stanford.smi.protege.model

BrowserSlotPattern(Slot) - Constructor for class edu.stanford.smi.protege.model.BrowserSlotPattern

BrowserSlotPattern(List) - Constructor for class edu.stanford.smi.protege.model.BrowserSlotPattern

browserTextChanged(FrameEvent) - Method in class edu.stanford.smi.protege.event.FrameAdapter

browserTextChanged(FrameEvent) - Method in interface edu.stanford.smi.protege.event.FrameListener

BrowserTextListFinder - Class in edu.stanford.smi.protege.ui

BrowserTextListFinder(JList, ResourceKey) - Constructor for class edu.stanford.smi.protege.ui.BrowserTextListFinder

bufcolumn - Variable in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

buffer - Variable in class edu.stanford.smi.protege.server.socket.deflate.CompressingInputStream

buffer - Variable in class edu.stanford.smi.protege.server.socket.deflate.CompressingOutputStream

buffer - Variable in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

BUFFER_SIZE - Static variable in class edu.stanford.smi.protege.server.socket.deflate.CompressingOutputStream

bufline - Variable in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

bufpos - Variable in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Position in buffer.

BUILD - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

buildGUI(Properties) - Method in class edu.stanford.smi.protege.widget.ProtegePropertiesComponent

buildNewProject(KnowledgeBaseFactory) - Method in class edu.stanford.smi.protege.plugin.AbstractCreateProjectPlugin

BuildProject - Class in edu.stanford.smi.protege.action

Action to build a project from component pieces (files)

BuildProject() - Constructor for class edu.stanford.smi.protege.action.BuildProject

buildProject(KnowledgeBaseFactory) - Method in class edu.stanford.smi.protege.ui.ProjectManager

buildProjectRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

BundleHelper - Class in edu.stanford.smi.protege.resource

BundleHelper(String, Class) - Constructor for class edu.stanford.smi.protege.resource.BundleHelper

ButtonConfigurationPanel - Class in edu.stanford.smi.protege.widget

Standard configuration panel for buttons on SlotWidgets.

ButtonConfigurationPanel(PropertyList) - Constructor for class edu.stanford.smi.protege.widget.ButtonConfigurationPanel

C

Cache<S,V,R> - Interface in edu.stanford.smi.protege.util.transaction.cache

This interface represents a simple cache mechanism for storing cached values either globally or on a per session basis.

CACHE_LOG - Static variable in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

CacheAbortComplete<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheAbortComplete() - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheAbortComplete

CacheBeginTransaction<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheBeginTransaction(S) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheBeginTransaction

CacheCommitTransaction<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheCommitTransaction(S) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheCommitTransaction

CacheCompleted<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheCompleted() - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheCompleted

CacheControlJob - Class in edu.stanford.smi.protege.server.job

CacheControlJob(KnowledgeBase, boolean, boolean) - Constructor for class edu.stanford.smi.protege.server.job.CacheControlJob

CacheDelete<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheDelete(S) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheDelete

CacheFactory - Class in edu.stanford.smi.protege.util.transaction.cache

CacheFactory() - Constructor for class edu.stanford.smi.protege.util.transaction.cache.CacheFactory

cacheLog - Static variable in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

CacheMap<X,Y> - Class in edu.stanford.smi.protege.util

Deprecated. use the transaction cache utilities.

CacheMap(int) - Constructor for class edu.stanford.smi.protege.util.CacheMap

Deprecated.

CacheMap() - Constructor for class edu.stanford.smi.protege.util.CacheMap

Deprecated.

CacheModify<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheModify(S, V, CacheResult<R>) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheModify

CacheRead<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheRead(S, V, CacheResult<R>) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheRead

CacheRequestReason - Enum in edu.stanford.smi.protege.server.framestore.background

CacheResult<R> - Class in edu.stanford.smi.protege.util.transaction.cache

CacheResult(R, boolean) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.CacheResult

CacheRollbackTransaction<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheRollbackTransaction(S) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheRollbackTransaction

CacheStartComplete<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.serialize

CacheStartComplete() - Constructor for class edu.stanford.smi.protege.util.transaction.cache.serialize.CacheStartComplete

calculateClosure(NarrowFrameStore, Frame, Slot, Facet, boolean) - Static method in class edu.stanford.smi.protege.model.framestore.ClosureUtils

CallCachingFrameStore - Class in edu.stanford.smi.protege.model.framestore

CallCachingFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.CallCachingFrameStore

canAs(Class<?>) - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

canAs(Object, Class<?>) - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

CANCEL_BUTTON_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

cancelShutdownProject(RemoteSession, String) - Method in interface edu.stanford.smi.protege.server.RemoteServer

cancelShutdownProject(RemoteSession, String) - Method in class edu.stanford.smi.protege.server.Server

canClose() - Method in class edu.stanford.smi.protege.ui.ProjectView

canClose(int) - Method in interface edu.stanford.smi.protege.util.ModalDialog.CloseCallback

canClose(int) - Method in class edu.stanford.smi.protege.util.ProjectChooser

canClose() - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

canClose() - Method in interface edu.stanford.smi.protege.widget.TabWidget

Called when the user attempts to close a project.

canCreateProject(KnowledgeBaseFactory, boolean) - Method in interface edu.stanford.smi.protege.plugin.CreateProjectPlugin

canCreateProject(KnowledgeBaseFactory, boolean) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesCreateProjectPlugin

canCreateProject(KnowledgeBaseFactory, boolean) - Method in class edu.stanford.smi.protege.storage.database.DatabaseCreateProjectPlugin

canExport(Project) - Method in class edu.stanford.smi.protege.plugin.AbstractExportPlugin

canExport(Project) - Method in interface edu.stanford.smi.protege.plugin.ExportProjectPlugin

canExport(Project) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

canExportToNewFormat(Project) - Method in class edu.stanford.smi.protege.plugin.AbstractBackendExportPlugin

canExportToNewFormat(Project) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

canFinish() - Method in class edu.stanford.smi.protege.util.Wizard

canGoBack() - Method in class edu.stanford.smi.protege.util.Wizard

canGoNext() - Method in class edu.stanford.smi.protege.util.Wizard

canRedo() - Method in interface edu.stanford.smi.protege.model.CommandManager

canRedo() - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

canRemove(Collection) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

canRemove(Collection) - Method in class edu.stanford.smi.protege.widget.DirectDomainWidget

canSave() - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

canSave() - Method in interface edu.stanford.smi.protege.widget.TabWidget

Called when the user attempts to save a project.

canStartDrag(Collection) - Method in class edu.stanford.smi.protege.ui.ClsesTreeDragSourceListener

canStartDrag(Collection) - Method in class edu.stanford.smi.protege.ui.SlotsTreeDragSourceListener

canStartDrag(Collection) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

canUndo() - Method in interface edu.stanford.smi.protege.model.CommandManager

canUndo() - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

capitalize(String) - Static method in class edu.stanford.smi.protege.util.StringUtilities

CARDINALITY - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

CARDINALITY - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

CARDINALITY - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

CARDINALITY - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

CARDINALITY - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

CardinalityFacetRenderer - Class in edu.stanford.smi.protege.ui

Renderer for cardinality facet in the template slots pane.

CardinalityFacetRenderer(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.ui.CardinalityFacetRenderer

cardinalityValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

CASCADE_WINDOWS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CascadeWindows - Class in edu.stanford.smi.protege.action

Cascade all of the top-level windows

CascadeWindows(boolean) - Constructor for class edu.stanford.smi.protege.action.CascadeWindows

cascadeWindows(Point, Collection) - Method in class edu.stanford.smi.protege.ui.ProjectManager

cascadeWindowsRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

center(Component) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

changed(ListSelectionEvent) - Method in class edu.stanford.smi.protege.util.ListSelectionListenerAdapter

changed(ActionEvent) - Method in class edu.stanford.smi.protege.util.SwitchableActionListener

changed(ItemEvent) - Method in class edu.stanford.smi.protege.util.SwitchableItemListener

changed(ListSelectionEvent) - Method in class edu.stanford.smi.protege.util.SwitchableListSelectionListener

changed(SelectionEvent) - Method in class edu.stanford.smi.protege.util.SwitchableSelectionListener

changedUpdate(DocumentEvent) - Method in class edu.stanford.smi.protege.util.DocumentChangedListener

ChangeIncludedProjects - Class in edu.stanford.smi.protege.action

Allow the user to change the included projects.

ChangeIncludedProjects() - Constructor for class edu.stanford.smi.protege.action.ChangeIncludedProjects

changeIncludedProjectURIsRequest(Collection) - Method in class edu.stanford.smi.protege.ui.ProjectManager

ChangeMonitorFrameStore - Class in edu.stanford.smi.protege.model.framestore

ChangeMonitorFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

ChangeProjectFormatWizardPage - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

ChangeProjectFormatWizardPage(ExportWizard, BackendExportPlugin, Project) - Constructor for class edu.stanford.smi.protege.plugin.ChangeProjectFormatWizardPage

ChangeProjectStorageFormat - Class in edu.stanford.smi.protege.action

Change the backend used to store a project

ChangeProjectStorageFormat() - Constructor for class edu.stanford.smi.protege.action.ChangeProjectStorageFormat

changeProjectStorageFormatRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

changeSize(int) - Static method in class edu.stanford.smi.protege.action.FontAction

characters(char[], int, int) - Method in class edu.stanford.smi.protege.storage.xml.XMLHandler

checkAuth() - Static method in class edu.stanford.smi.protege.server.socket.SSLFactory

CheckBoxRenderer - Class in edu.stanford.smi.protege.ui

Renderer to display a check box to acquire a boolean value.

CheckBoxRenderer() - Constructor for class edu.stanford.smi.protege.ui.CheckBoxRenderer

CheckBoxWidget - Class in edu.stanford.smi.protege.widget

A check box slot widget for use with boolean slots.

CheckBoxWidget() - Constructor for class edu.stanford.smi.protege.widget.CheckBoxWidget

checkConnection() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

checkDropTarget(Component, Object) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

checkMySQLBug() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

This routine checks for a bug in mysql.

checkUniqueness(String) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

childAdded(Object) - Method in class edu.stanford.smi.protege.util.LazyTreeNode

childAdded(Object, int) - Method in class edu.stanford.smi.protege.util.LazyTreeNode

childRemoved(Object) - Method in class edu.stanford.smi.protege.util.LazyTreeNode

children() - Method in class edu.stanford.smi.protege.util.LazyTreeNode

childReplaced(Object, Object) - Method in class edu.stanford.smi.protege.util.LazyTreeRoot

CLASS - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

CLASS - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

CLASS - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.ElementName

CLASS_ADD - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_ADD_SUPERCLASS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BOOLEAN - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASS_BROWSER_ALL_RELATIONS_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_CHANGE_METACLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_CHANGE_METACLASS_OF_SUBCLASSES_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_COLLAPSE_TREE_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_CREATE_SUBCLASS_USING_METACLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_EXPAND_TREE_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_FOR_PROJECT_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_HIDE_CLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_HIERARCHY_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SET_AS_DEFAULT_METACLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SET_AS_DEFAULT_METASLOT_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SHOW_ALL_RELATIONS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SHOW_CLASS_HIERARCHY_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SHOW_RELATION_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_SUPERCLASSES_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_UNHIDE_CLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_UNSET_AS_DEFAULT_METACLASS_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_BROWSER_UNSET_AS_DEFAULT_METASLOT_MENU_ITEM - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_COPY - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_CREATE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_CREATE_SUBCLASS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_DELETE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_EDITOR_FOR_CLASS_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_EDITOR_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_INTEGER - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASS_MAP - Static variable in class edu.stanford.smi.protege.model.Project

CLASS_MOVE_DOWN - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_MOVE_UP - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_NOTE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_NOTE_CREATE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_NOTE_DELETE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_NOTE_HIDE_ALL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_PROPERTY_LIST - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASS_RECTANGLE - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASS_REMOVE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_REMOVE_SUPERCLASS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_SEARCH_FOR - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_STRING - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASS_TYPE - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.AttributeValue

CLASS_VIEW - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_VIEW_REFERENCES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLASS_WIDGET_DESCRIPTOR - Static variable in class edu.stanford.smi.protege.util.PropertyList

CLASSES_VIEW_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CleanDispatchFrameStore - Class in edu.stanford.smi.protege.model.framestore.cleandispatch

CleanDispatchFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.cleandispatch.CleanDispatchFrameStore

Clear - Class in edu.stanford.smi.protege.action

TODO Class Comment

Clear(boolean) - Constructor for class edu.stanford.smi.protege.action.Clear

clear() - Method in class edu.stanford.smi.protege.util.DefaultErrorHandler

clear() - Method in class edu.stanford.smi.protege.util.DefaultRenderer

clear() - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Removes all of the elements from this list.

clear() - Method in class edu.stanford.smi.protege.util.MultiMap

clear() - Method in class edu.stanford.smi.protege.util.PropertyList

clear() - Method in class edu.stanford.smi.protege.util.RowTableModel

clear() - Method in class edu.stanford.smi.protege.util.SimpleListModel

CLEAR_ACTION - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

clearAllListeners() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

clearAllListeners() - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

clearAllListeners() - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

clearCachedWidgets() - Method in class edu.stanford.smi.protege.model.Project

clearIsDirty() - Method in class edu.stanford.smi.protege.model.Project

clearListeners() - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

clearListValues(JList) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

clearSelection() - Method in class edu.stanford.smi.protege.util.FileList

clearSelection() - Method in interface edu.stanford.smi.protege.util.Selectable

clearSelection() - Method in class edu.stanford.smi.protege.util.SelectableContainer

clearSelection() - Method in class edu.stanford.smi.protege.util.URIList

clearSelection() - Method in class edu.stanford.smi.protege.widget.AbstractWidget

clearSelection() - Method in class edu.stanford.smi.protege.widget.FormWidget

clearSelection() - Method in class edu.stanford.smi.protege.widget.InstanceValuesComponent

clearValue() - Method in class edu.stanford.smi.protege.util.IntegerField

ClientAndFrame - Class in edu.stanford.smi.protege.server.framestore.background

ClientAndFrame(RemoteSession, Frame) - Constructor for class edu.stanford.smi.protege.server.framestore.background.ClientAndFrame

ClientCacheRequestor - Class in edu.stanford.smi.protege.server.framestore.background

ClientCacheRequestor(RemoteServerFrameStore, RemoteSession) - Constructor for class edu.stanford.smi.protege.server.framestore.background.ClientCacheRequestor

ClientCacheRequestor.RequestorThread - Class in edu.stanford.smi.protege.server.framestore.background

ClientCacheRequestor.RequestorThread() - Constructor for class edu.stanford.smi.protege.server.framestore.background.ClientCacheRequestor.RequestorThread

ClientCacheRequestor.ThreadStatus - Enum in edu.stanford.smi.protege.server.framestore.background

ClientConnectMain - Class in edu.stanford.smi.protege.server

ClientConnectMain(String[]) - Constructor for class edu.stanford.smi.protege.server.ClientConnectMain

CLIPS_FILES_TO_EXPORT_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLIPS_FILES_TO_IMPORT_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ClipsExportToNewFormatWizardPage - Class in edu.stanford.smi.protege.storage.clips

TODO Class Comment

ClipsExportToNewFormatWizardPage(Wizard, Project, ClipsFilesExportProjectPlugin) - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsExportToNewFormatWizardPage

ClipsFilePanel - Class in edu.stanford.smi.protege.storage.clips

ClipsFilePanel() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsFilePanel

ClipsFilesCreateProjectPlugin - Class in edu.stanford.smi.protege.storage.clips

TODO Class Comment

ClipsFilesCreateProjectPlugin() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsFilesCreateProjectPlugin

ClipsFilesExportProjectPlugin - Class in edu.stanford.smi.protege.storage.clips

Export plugins for the CLIPS file format.

ClipsFilesExportProjectPlugin() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

ClipsFilesPlugin - Interface in edu.stanford.smi.protege.storage.clips

TODO Class Comment

ClipsFilesWizardPage - Class in edu.stanford.smi.protege.storage.clips

TODO Class Comment

ClipsFilesWizardPage(Wizard, ClipsFilesPlugin) - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsFilesWizardPage

ClipsFileWriter - Class in edu.stanford.smi.protege.storage.clips

Base class for classes which generate clips files.

ClipsFileWriter(Writer) - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsFileWriter

ClipsImportExportPlugin - Class in edu.stanford.smi.protege.storage.clips

Import and Export plugins for the CLIPS file format.

ClipsImportExportPlugin() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsImportExportPlugin

ClipsKnowledgeBaseFactory - Class in edu.stanford.smi.protege.storage.clips

Storage backend to maintain a knowledge base in Clips 6.0 file format.

ClipsKnowledgeBaseFactory() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsKnowledgeBaseFactory

ClipsUtil - Class in edu.stanford.smi.protege.storage.clips

Utilities for handling text io in clips file format.

ClipsUtil() - Constructor for class edu.stanford.smi.protege.storage.clips.ClipsUtil

clone() - Method in class edu.stanford.smi.protege.model.WidgetDescriptor

clone() - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Returns a shallow copy of this LinkedList .

clone() - Method in class edu.stanford.smi.protege.util.PropertyList

clone() - Method in class edu.stanford.smi.protege.util.Tree

cloneSession(RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServer

cloneSession(RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

close(Writer) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

close(Reader) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

close() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

close() - Method in class edu.stanford.smi.protege.model.framestore.AbstractFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.cleandispatch.CleanDispatchFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

close() - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

close() - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

close() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

close() - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

close() - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

close() - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

close(RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

close(RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

close(RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

close(RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

close(RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServerProject

close() - Method in interface edu.stanford.smi.protege.server.RemoteSimpleStream

close(RemoteSession) - Method in class edu.stanford.smi.protege.server.ServerProject

close() - Method in class edu.stanford.smi.protege.server.SimpleStream

close() - Method in class edu.stanford.smi.protege.server.socket.CompressionAspect

close() - Method in class edu.stanford.smi.protege.server.socket.MonitoringAspect

close() - Method in class edu.stanford.smi.protege.server.socket.MonitoringInputStream

close() - Method in class edu.stanford.smi.protege.server.socket.MonitoringOutputStream

close() - Method in class edu.stanford.smi.protege.server.socket.SimulateDelayAspect

close() - Method in interface edu.stanford.smi.protege.server.socket.SocketAspect

close() - Method in class edu.stanford.smi.protege.server.socket.SocketWithAspects

close() - Method in class edu.stanford.smi.protege.server.socket.TeeAspect

close() - Method in class edu.stanford.smi.protege.server.socket.TeeOutputStream

close() - Method in class edu.stanford.smi.protege.server.util.ZipSocket

close() - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

close() - Method in interface edu.stanford.smi.protege.storage.database.DatabaseFrameDb

close() - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

close() - Method in class edu.stanford.smi.protege.storage.database.pool.ConnectionInfo

close() - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

close() - Method in class edu.stanford.smi.protege.ui.ProjectView

close(InputStream) - Static method in class edu.stanford.smi.protege.util.FileUtilities

close(Reader) - Static method in class edu.stanford.smi.protege.util.FileUtilities

close(Writer) - Static method in class edu.stanford.smi.protege.util.FileUtilities

close() - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

close() - Method in interface edu.stanford.smi.protege.widget.TabWidget

Called when the user attempts to close a project and all tabs return 'true' from their #canClose() methods.

CLOSE_ALL_WINDOWS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLOSE_BUTTON_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CLOSE_VIEW - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CloseAllWindows - Class in edu.stanford.smi.protege.action

Close all of the top-level windows except the main window

CloseAllWindows(boolean) - Constructor for class edu.stanford.smi.protege.action.CloseAllWindows

closeAllWindows() - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

closeButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.ui.IconDialog

closeButton_actionPerformed(ActionEvent) - Method in class edu.stanford.smi.protege.ui.WelcomeDialog

closeCurrentProject() - Method in class edu.stanford.smi.protege.ui.ProjectManager

CloseCurrentView - Class in edu.stanford.smi.protege.action

CloseCurrentView() - Constructor for class edu.stanford.smi.protege.action.CloseCurrentView

closeCurrentView() - Method in class edu.stanford.smi.protege.ui.ProjectView

closed(ProjectViewEvent) - Method in interface edu.stanford.smi.protege.util.ProjectViewListener

CloseProject - Class in edu.stanford.smi.protege.action

Request a close of the project.

CloseProject() - Constructor for class edu.stanford.smi.protege.action.CloseProject

closeProjectRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

closeSession(RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServer

closeSession(RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

closeStatements() - Method in class edu.stanford.smi.protege.storage.database.pool.ConnectionInfo

closeStatements(Connection) - Method in class edu.stanford.smi.protege.storage.database.pool.ConnectionPool

closeStatements() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

closeWindow(Window) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

ClosureCachingBasicFrameStore - Class in edu.stanford.smi.protege.model.framestore

ClosureCachingBasicFrameStore(NarrowFrameStore) - Constructor for class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

ClosureUtils - Class in edu.stanford.smi.protege.model.framestore

ClosureUtils() - Constructor for class edu.stanford.smi.protege.model.framestore.ClosureUtils

Cls - Interface in edu.stanford.smi.protege.model

A frame which has one or more superclasses, may have subclasses, and which exhibits inheritance behavior (such as inheritance of slots).

CLS - Static variable in class edu.stanford.smi.protege.model.ValueType

cls() - Method in class edu.stanford.smi.protege.storage.clips.Parser

CLS_CREATED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

CLS_DELETED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

ClsAdapter - Class in edu.stanford.smi.protege.event

Adapter for the ClsListener interface.

ClsAdapter() - Constructor for class edu.stanford.smi.protege.event.ClsAdapter

ClsClsReferenceNode - Class in edu.stanford.smi.protege.ui

A TreeNode that will display a relationship (other than inheritance) between two classes.

ClsClsReferenceNode(LazyTreeNode, Cls, Slot) - Constructor for class edu.stanford.smi.protege.ui.ClsClsReferenceNode

ClsClsReferenceRoot - Class in edu.stanford.smi.protege.ui

A TreeRoot for Cls-Cls preferences.

ClsClsReferenceRoot(KnowledgeBase, Slot) - Constructor for class edu.stanford.smi.protege.ui.ClsClsReferenceRoot

ClsCode - Class in edu.stanford.smi.protege.code.generator.wrapping

Code generator for a class.

ClsCode(Cls) - Constructor for class edu.stanford.smi.protege.code.generator.wrapping.ClsCode

clsCreated(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

clsCreated(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

clsDeleted(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

clsDeleted(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

ClsesAndInstancesTab - Class in edu.stanford.smi.protege.widget

This tab is an attempt to merge the functionality of ClsesTab and the InstancesTab.

ClsesAndInstancesTab() - Constructor for class edu.stanford.smi.protege.widget.ClsesAndInstancesTab

clsesList() - Method in class edu.stanford.smi.protege.storage.clips.Parser

ClsesPanel - Class in edu.stanford.smi.protege.ui

The left upper display of the classes tab.

ClsesPanel(Project) - Constructor for class edu.stanford.smi.protege.ui.ClsesPanel

ClsesTab - Class in edu.stanford.smi.protege.widget

The classes tab.

ClsesTab() - Constructor for class edu.stanford.smi.protege.widget.ClsesTab

ClsesTreeDragSourceListener - Class in edu.stanford.smi.protege.ui

Source listener drag and drop support for the SlotsTree.

ClsesTreeDragSourceListener() - Constructor for class edu.stanford.smi.protege.ui.ClsesTreeDragSourceListener

ClsesTreeTarget - Class in edu.stanford.smi.protege.ui

Target support for Clses tree drag and drop support.

ClsesTreeTarget() - Constructor for class edu.stanford.smi.protege.ui.ClsesTreeTarget

ClsEvent - Class in edu.stanford.smi.protege.event

Event generated when a class is changed.

ClsEvent(Cls, int, Object) - Constructor for class edu.stanford.smi.protege.event.ClsEvent

ClsEvent(Cls, int, Object, Object) - Constructor for class edu.stanford.smi.protege.event.ClsEvent

ClsEventDispatcher - Class in edu.stanford.smi.protege.event

Dispatches Cls events to ClsListener instances.

ClsEventDispatcher() - Constructor for class edu.stanford.smi.protege.event.ClsEventDispatcher

ClsFieldWidget - Class in edu.stanford.smi.protege.widget

SlotWidget for acquiring and displaying a cardinality single Cls object.

ClsFieldWidget() - Constructor for class edu.stanford.smi.protege.widget.ClsFieldWidget

ClsInverseRelationshipPanel - Class in edu.stanford.smi.protege.ui

This panel displays the superclasses of a given class and allows the user to add or remove a superclass.

ClsInverseRelationshipPanel(Project) - Constructor for class edu.stanford.smi.protege.ui.ClsInverseRelationshipPanel

ClsListener - Interface in edu.stanford.smi.protege.event

Listener for events resulting from a class change.

ClsListWidget - Class in edu.stanford.smi.protege.widget

SlotWidget for acquiring and displaying a list of Cls objects.

ClsListWidget() - Constructor for class edu.stanford.smi.protege.widget.ClsListWidget

clsReference() - Method in class edu.stanford.smi.protege.storage.clips.Parser

ClsReferencersAction - Class in edu.stanford.smi.protege.action

ClsReferencersAction(Selectable) - Constructor for class edu.stanford.smi.protege.action.ClsReferencersAction

clsRole(Cls) - Method in class edu.stanford.smi.protege.storage.clips.Parser

ClsStorer - Class in edu.stanford.smi.protege.storage.clips

Store a set of classes in Clips ontology file format Clips requires that clses be stored so that there are no forward references so we start at root and descend the class hierarchy writing out classes whose parents have already been written out.

ClsStorer(Writer) - Constructor for class edu.stanford.smi.protege.storage.clips.ClsStorer

ClsTreeFinder - Class in edu.stanford.smi.protege.ui

Implementation of the Finder interface to locate and highlight classes whose names match a given string.

ClsTreeFinder(KnowledgeBase, JTree) - Constructor for class edu.stanford.smi.protege.ui.ClsTreeFinder

ClsTreeFinder(KnowledgeBase, JTree, ResourceKey) - Constructor for class edu.stanford.smi.protege.ui.ClsTreeFinder

ClsTreeFinder(KnowledgeBase, JTree, String) - Constructor for class edu.stanford.smi.protege.ui.ClsTreeFinder

ClsTreeFinder(KnowledgeBase, JTree, String, Icon) - Constructor for class edu.stanford.smi.protege.ui.ClsTreeFinder

ClsWidget - Interface in edu.stanford.smi.protege.widget

The interface for display forms that display the contents of an entire class and all the contents to be edited.

CODE_MENU - Static variable in class edu.stanford.smi.protege.code.generator.wrapping.CodeGeneratorProjectPlugin

CodeGeneratorProjectPlugin - Class in edu.stanford.smi.protege.code.generator.wrapping

CodeGeneratorProjectPlugin() - Constructor for class edu.stanford.smi.protege.code.generator.wrapping.CodeGeneratorProjectPlugin

COLLECTION_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

COLLECTION_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

COLLECTION_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

COLLECTION_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

CollectionUtilities - Class in edu.stanford.smi.protege.util

Description of the class

CollectionUtilities() - Constructor for class edu.stanford.smi.protege.util.CollectionUtilities

Colors - Class in edu.stanford.smi.protege.resource

Colors() - Constructor for class edu.stanford.smi.protege.resource.Colors

column - Variable in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Column - Enum in edu.stanford.smi.protege.storage.database.stmt

comboBoxValueChanged() - Method in class edu.stanford.smi.protege.widget.ComboBoxWidget

comboBoxValueChanged() - Method in class edu.stanford.smi.protege.widget.RoleWidget

ComboBoxWidget - Class in edu.stanford.smi.protege.widget

Slot widget for displaying the "allowed values" of a value-type=Symbol slot.

ComboBoxWidget() - Constructor for class edu.stanford.smi.protege.widget.ComboBoxWidget

Command - Interface in edu.stanford.smi.protege.model.framestore.undo

COMMAND_HISTORY_ACTION - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

COMMAND_HISTORY_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

CommandHistoryPanel - Class in edu.stanford.smi.protege.ui

Panel to display the commands that have been executed an allow the user to undo/redo them.

CommandHistoryPanel(CommandManager) - Constructor for class edu.stanford.smi.protege.ui.CommandHistoryPanel

CommandManager - Interface in edu.stanford.smi.protege.model

commaSeparatedList(Collection) - Static method in class edu.stanford.smi.protege.util.StringUtilities

COMMENT - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

COMMENT_LINE - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

commit() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

commitChanges() - Method in class edu.stanford.smi.protege.ui.EncodingsPanel

commitChanges() - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

commitTransaction() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

commitTransaction() - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

commitTransaction() - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.TransactionFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

commitTransaction() - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Commits the recently opened transaction

commitTransaction() - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

commitTransaction(RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

commitTransaction(RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

commitTransaction(RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

commitTransaction(RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

commitTransaction(RemoteSession) - Method in class edu.stanford.smi.protege.server.update.DeferredOperationCache

commitTransaction() - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

commitTransaction() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

commitTransaction() - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

commitTransaction() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

commitTransaction() - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

commitTransaction(S) - Method in interface edu.stanford.smi.protege.util.transaction.cache.Cache

A transaction is committed.

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.InvalidatableCache

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadCommittedCache

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadUncommittedCache

commitTransaction(S) - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.RepeatableReadCache

commitTransaction() - Method in class edu.stanford.smi.protege.util.transaction.TransactionMonitor

commitTransaction() - Method in class edu.stanford.smi.protege.widget.AbstractWidget

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.BrowserComparator

compare(X, X) - Method in class edu.stanford.smi.protege.ui.FrameComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.FrameNameComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.FrameSlotPairComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.LazyTreeNodeFrameComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.LocaleComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.ui.ParentChildNodeComparator

compare(Reference, Reference) - Method in class edu.stanford.smi.protege.ui.ReferenceComparator

compare(FrameWithBrowserText, FrameWithBrowserText) - Method in class edu.stanford.smi.protege.util.FrameWithBrowserTextComparator

compare(Object, Object) - Method in class edu.stanford.smi.protege.widget.SlotWidgetComparer

compareTo(SlotAtClassCode) - Method in class edu.stanford.smi.protege.code.generator.wrapping.SlotAtClassCode

compareTo(Object) - Method in class edu.stanford.smi.protege.code.generator.wrapping.SlotCode

compareTo(Frame) - Method in class edu.stanford.smi.protege.model.DefaultFrame

compareTo(Object) - Method in class edu.stanford.smi.protege.model.ValueType

compareTo(WorkInfo) - Method in class edu.stanford.smi.protege.server.framestore.background.WorkInfo

compareTo(Object, Object) - Method in class edu.stanford.smi.protege.util.LazyTreeNode

CompleteableCache<S,V,R> - Class in edu.stanford.smi.protege.util.transaction.cache.impl

This is a basic cache that takes the behavior of its delegate.

CompleteableCache(Cache<S, V, R>) - Constructor for class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

COMPONENT_MENU - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ComponentFactory - Class in edu.stanford.smi.protege.util

Factory class for making swing components, and their variants.

ComponentFactory() - Constructor for class edu.stanford.smi.protege.util.ComponentFactory

ComponentUtilities - Class in edu.stanford.smi.protege.util

Utility methods for dealing with various swing components.

ComponentUtilities() - Constructor for class edu.stanford.smi.protege.util.ComponentUtilities

COMPOSITE - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

CompressingInputStream - Class in edu.stanford.smi.protege.server.socket.deflate

This code is based on the ideas presented in http://javatechniques.com/blog/compressing-data-sent-over-a-socket/ by Philip Isenhour.

CompressingInputStream(InputStream) - Constructor for class edu.stanford.smi.protege.server.socket.deflate.CompressingInputStream

CompressingOutputStream - Class in edu.stanford.smi.protege.server.socket.deflate

This code is based on the ideas presented in http://javatechniques.com/blog/compressing-data-sent-over-a-socket/ by Philip Isenhour.

CompressingOutputStream(OutputStream) - Constructor for class edu.stanford.smi.protege.server.socket.deflate.CompressingOutputStream

COMPRESSION_PAD - Static variable in class edu.stanford.smi.protege.server.socket.deflate.CompressingOutputStream

CompressionAspect - Class in edu.stanford.smi.protege.server.socket

CompressionAspect(SocketAspect) - Constructor for class edu.stanford.smi.protege.server.socket.CompressionAspect

CONCRETE - Static variable in class edu.stanford.smi.protege.model.RoleConstraint

CONCRETE - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ConcurrentListModel - Class in edu.stanford.smi.protege.util

This class is a trivial extension of the SimpleListModel.

ConcurrentListModel() - Constructor for class edu.stanford.smi.protege.util.ConcurrentListModel

configure(ProjectView) - Static method in class edu.stanford.smi.protege.server.util.RemoteProjectUtil

configure() - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

configure() - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

configure() - Method in class edu.stanford.smi.protege.widget.FormWidget

configure() - Method in class edu.stanford.smi.protege.widget.KAToolTab

configure() - Method in class edu.stanford.smi.protege.widget.UglyClsWidget

configure() - Method in interface edu.stanford.smi.protege.widget.Widget

CONFIGURE_ARCHIVE_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ConfigureAction - Class in edu.stanford.smi.protege.ui

TODO Class Comment

ConfigureAction() - Constructor for class edu.stanford.smi.protege.ui.ConfigureAction

ConfigureArchive - Class in edu.stanford.smi.protege.action

ConfigureArchive() - Constructor for class edu.stanford.smi.protege.action.ConfigureArchive

ConfigureArchivePanel - Class in edu.stanford.smi.protege.action

ConfigureArchivePanel(Project) - Constructor for class edu.stanford.smi.protege.action.ConfigureArchivePanel

configureCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

configureFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

ConfigureProject - Class in edu.stanford.smi.protege.action

Bring up the configuration panel for the current project.

ConfigureProject() - Constructor for class edu.stanford.smi.protege.action.ConfigureProject

ConfigureProjectPanel - Class in edu.stanford.smi.protege.ui

The global configuration panel.

ConfigureProjectPanel(Project) - Constructor for class edu.stanford.smi.protege.ui.ConfigureProjectPanel

configureProjectRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

ConfigureProtegePropertiesPanel - Class in edu.stanford.smi.protege.ui

Configuration panel for setting the proteg.properties and protege LAX properties

ConfigureProtegePropertiesPanel(Project) - Constructor for class edu.stanford.smi.protege.ui.ConfigureProtegePropertiesPanel

configureSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

configureSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

configureTable(JTable) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

configureTable(JTable) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

configureTree(JTree, Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

connect() - Method in class edu.stanford.smi.protege.server.ClientConnectMain

ConnectionInfo - Class in edu.stanford.smi.protege.storage.database.pool

ConnectionInfo(Connection) - Constructor for class edu.stanford.smi.protege.storage.database.pool.ConnectionInfo

ConnectionPool - Class in edu.stanford.smi.protege.storage.database.pool

A Connection Pool

connectToMetaProject(RemoteServer, RemoteSession) - Method in class edu.stanford.smi.protege.server.RemoteProjectManager

connectToProject(RemoteServer, RemoteSession, String) - Method in class edu.stanford.smi.protege.server.RemoteProjectManager

ConsoleFormatter - Class in edu.stanford.smi.protege.util

TODO Class Comment

ConsoleFormatter() - Constructor for class edu.stanford.smi.protege.util.ConsoleFormatter

constant() - Method in class edu.stanford.smi.protege.storage.clips.Parser

constants() - Method in class edu.stanford.smi.protege.storage.clips.Parser

CONSTRAINT - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

CONSTRAINT - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

CONSTRAINTS - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

CONSTRAINTS - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

CONSTRAINTS - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

CONSTRAINTS - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

CONSTRAINTS_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ConstraintsWidget - Class in edu.stanford.smi.protege.widget

SlotWidget for displaying "constraints".

ConstraintsWidget() - Constructor for class edu.stanford.smi.protege.widget.ConstraintsWidget

constraintValueDescription(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

constraintValueDescriptionExtension(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

contains(Slot) - Method in class edu.stanford.smi.protege.model.BrowserSlotPattern

CONTAINS - Static variable in interface edu.stanford.smi.protege.model.query.Query

contains(Object) - Method in class edu.stanford.smi.protege.util.ConcurrentListModel

contains(Object) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Returns true if this list contains the specified element.

contains(Object) - Method in class edu.stanford.smi.protege.util.SimpleListModel

contains(Object) - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

containSameItems(Collection, Collection) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

containsAny(Collection, Collection) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

Returns true if there is any element that is common to both collections.

containsFrame(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

containsFrame(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

containsFrame(Frame) - Method in interface edu.stanford.smi.protege.model.Storage

containsFrame(String) - Method in interface edu.stanford.smi.protege.model.Storage

ControlFrameCalculatorCachingJob - Class in edu.stanford.smi.protege.util

ControlFrameCalculatorCachingJob(KnowledgeBase, boolean) - Constructor for class edu.stanford.smi.protege.util.ControlFrameCalculatorCachingJob

ControlServerPanel - Class in edu.stanford.smi.protege.server.admin

ControlServerPanel(RemoteServer, RemoteSession) - Constructor for class edu.stanford.smi.protege.server.admin.ControlServerPanel

CONVERT_UNICODE_SEQUENCE_ACTION - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

convertToNumber(String) - Method in class edu.stanford.smi.protege.util.FloatValidator

convertToNumber(String) - Method in class edu.stanford.smi.protege.util.IntegerValidator

convertToNumber(String) - Method in interface edu.stanford.smi.protege.util.NumberValidator

ConvertUnicodeSequenceAction - Class in edu.stanford.smi.protege.action

ConvertUnicodeSequenceAction() - Constructor for class edu.stanford.smi.protege.action.ConvertUnicodeSequenceAction

Copy - Class in edu.stanford.smi.protege.action

TODO Class Comment

Copy(boolean) - Constructor for class edu.stanford.smi.protege.action.Copy

copy(int, boolean) - Method in class edu.stanford.smi.protege.action.MakeCopiesAction

copy(Instance, boolean) - Method in class edu.stanford.smi.protege.action.MakeCopiesAction

copy(KnowledgeBase, Map, boolean) - Method in class edu.stanford.smi.protege.model.DefaultFrame

copy(KnowledgeBase, Map, boolean) - Method in class edu.stanford.smi.protege.model.DefaultInstance

copy(KnowledgeBase, Map, boolean) - Method in interface edu.stanford.smi.protege.model.Frame

COPY_ACTION - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

COPY_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

copyClientInformation(KnowledgeBase, KnowledgeBase, KnowledgeBase, boolean) - Static method in class edu.stanford.smi.protege.model.Project

Utility method that copies the client information from the source project KB to a target project KB.

create(Class) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

create(Instance) - Static method in class edu.stanford.smi.protege.model.WidgetDescriptor

create(KnowledgeBase) - Static method in class edu.stanford.smi.protege.model.WidgetDescriptor

create(KnowledgeBase) - Static method in class edu.stanford.smi.protege.util.PropertyList

CREATE_ACCESSOR - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

createAccessorFacet(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

CreateAction - Class in edu.stanford.smi.protege.util

Base class for the create operation that is available on most widgets.

CreateAction(ResourceKey) - Constructor for class edu.stanford.smi.protege.util.CreateAction

CreateAction(String) - Constructor for class edu.stanford.smi.protege.util.CreateAction

CreateAction(String, Icon) - Constructor for class edu.stanford.smi.protege.util.CreateAction

createActions() - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

createActions() - Method in class edu.stanford.smi.protege.widget.URLWidget

createAll() - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

createBufferedReader(String) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedReader(File) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedReader(InputStream) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedReader(URI) - Static method in class edu.stanford.smi.protege.util.URIUtilities

createBufferedWriter(File, boolean) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedWriter(String) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedWriter(File) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createBufferedWriter(URI, boolean) - Static method in class edu.stanford.smi.protege.util.URIUtilities

createBuildProject(KnowledgeBaseFactory, Collection) - Static method in class edu.stanford.smi.protege.model.Project

createBuildProject(KnowledgeBase, Collection) - Static method in class edu.stanford.smi.protege.model.Project

createButton(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createCenterComponent() - Method in class edu.stanford.smi.protege.server.admin.AbstractRefreshableServerPanel

createCenterComponent() - Method in class edu.stanford.smi.protege.server.admin.ControlServerPanel

createCenterComponent() - Method in class edu.stanford.smi.protege.server.admin.MetaprojectPanel

createCenterComponent() - Method in class edu.stanford.smi.protege.server.admin.ProjectsServerPanel

createCenterComponent() - Method in class edu.stanford.smi.protege.server.admin.SessionServerPanel

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.DigestedPasswordWidget

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.ImageWidget

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.TextAreaWidget

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.TextFieldWidget

createCenterComponent(JTextComponent) - Method in class edu.stanford.smi.protege.widget.URLWidget

createCheckBox() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createCheckBox(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createCheckBox() - Method in class edu.stanford.smi.protege.widget.CheckBoxWidget

createCheckBoxMenuItem(Action, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createCls(String, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createCls(String, Collection) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createCls(String, Collection, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createCls(String, Collection, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createCls(FrameID, Collection) - Method in interface edu.stanford.smi.protege.model.FrameFactory

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

createCls(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createCls(FrameID, Class) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createCls(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

createCls(String, Collection) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createCls(String, Collection, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createCls(String, Collection, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createCls(FrameID, Collection, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.FrameCalculatorFrameStore

createCls(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

createCls(FrameID, Collection, Collection, boolean, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

createCls(FrameID, Collection, Collection, boolean, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

CreateClsAction - Class in edu.stanford.smi.protege.action

CreateClsAction() - Constructor for class edu.stanford.smi.protege.action.CreateClsAction

createClsBrowserHeader() - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createClsDisplay() - Method in class edu.stanford.smi.protege.widget.ClsesTab

createClsesField() - Method in class edu.stanford.smi.protege.storage.clips.FileSourcesPanel

createClsesLabeledComponent(KnowledgeBase, Collection) - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createClsesPanel() - Method in class edu.stanford.smi.protege.widget.ClsesTab

createClsesSplitter() - Method in class edu.stanford.smi.protege.widget.ClsesTab

createClsTree(Collection) - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createClsWidget(WidgetDescriptor, boolean, Project, Cls) - Static method in class edu.stanford.smi.protege.widget.WidgetUtilities

createCollapseAllAction() - Method in class edu.stanford.smi.protege.ui.SubslotPane

createCollection() - Method in class edu.stanford.smi.protege.util.ArrayListMultiMap

createCollection(X) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

createCollection() - Method in class edu.stanford.smi.protege.util.ListMultiMap

Deprecated.

createCollection() - Method in class edu.stanford.smi.protege.util.MultiMap

createCollection() - Method in class edu.stanford.smi.protege.util.SetMultiMap

createComboBox() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createComboBox() - Method in class edu.stanford.smi.protege.widget.ComboBoxWidget

createConfigureAction() - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createConfigureAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createConnection() - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

createCopyAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createCreateAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createCreateInstanceAction() - Method in class edu.stanford.smi.protege.ui.InstanceField

createCreateProjectWizardPage(CreateProjectWizard, boolean) - Method in interface edu.stanford.smi.protege.plugin.CreateProjectPlugin

createCreateProjectWizardPage(CreateProjectWizard, boolean) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesCreateProjectPlugin

createCreateProjectWizardPage(CreateProjectWizard, boolean) - Method in class edu.stanford.smi.protege.storage.database.DatabaseCreateProjectPlugin

createDatabaseFrameDb(Class<? extends DatabaseFrameDb>) - Static method in class edu.stanford.smi.protege.storage.database.DatabaseFrameDbFactory

createDeleteAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createDeleteInstancesAction() - Method in class edu.stanford.smi.protege.ui.InstanceField

createDescriptorsAndWidgets(Collection) - Method in class edu.stanford.smi.protege.widget.FormWidget

createDialog(Component) - Method in class edu.stanford.smi.protege.util.ProjectChooser

createDirectAllInstanceComboBox() - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createDirectInstance(String) - Method in interface edu.stanford.smi.protege.model.Cls

createDirectInstance(String) - Method in class edu.stanford.smi.protege.model.DefaultCls

createDirectInstancesList() - Method in class edu.stanford.smi.protege.widget.InstancesTab

createDirectTypesList() - Method in class edu.stanford.smi.protege.widget.ClsesAndInstancesTab

createDirectTypesList() - Method in class edu.stanford.smi.protege.widget.InstancesTab

createDomainKnowledgeBase(KnowledgeBaseFactory, Collection, boolean) - Method in class edu.stanford.smi.protege.model.Project

createDriverComponent() - Method in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseSourcesEditor

createEditorPane() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createEditPasswordAction() - Method in class edu.stanford.smi.protege.widget.DigestedPasswordWidget

createEmptyCache(KnowledgeBase) - Static method in class edu.stanford.smi.protege.util.transaction.cache.CacheFactory

createEmptyCache(TransactionIsolationLevel) - Static method in class edu.stanford.smi.protege.util.transaction.cache.CacheFactory

createExpandAllAction() - Method in class edu.stanford.smi.protege.ui.SubslotPane

createExportToNewFormatWizardPage(ExportWizard, Project) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

createExportWizardPage(ExportWizard, Project) - Method in interface edu.stanford.smi.protege.plugin.ExportProjectPlugin

createExportWizardPage(ExportWizard, Project) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

createFacet(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFacet(String, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFacet(String, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFacet(FrameID, Collection) - Method in interface edu.stanford.smi.protege.model.FrameFactory

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

createFacet(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createFacet(FrameID, Class) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore

createFacet(FrameID, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createFacet(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

createFacet(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createFacet(String, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createFacet(String, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.FrameCalculatorFrameStore

createFacet(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

createFacet(FrameID, Collection, boolean, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

createFacet(FrameID, Collection, boolean, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

createFactoryClass() - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

createField() - Method in class edu.stanford.smi.protege.storage.xml.FileSourcesPanel

createFileChooser(String, String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createFileChooser(String, String, String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createFileChooser(String, ExtensionFilter) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createFooterComponent() - Method in class edu.stanford.smi.protege.server.admin.AbstractRefreshableServerPanel

createFrame(Cls, Slot) - Method in class edu.stanford.smi.protege.model.Project

createFrame(Instance) - Method in class edu.stanford.smi.protege.model.Project

createFrame(InstanceDisplay, Object) - Method in class edu.stanford.smi.protege.model.Project

createFrame() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createFrameFactory() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFrameFromClassId(int, FrameID) - Method in interface edu.stanford.smi.protege.model.FrameFactory

createFrameFromClassId(int, FrameID) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createFrameStoreManager() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createFromSerialization(KnowledgeBase, String) - Static method in class edu.stanford.smi.protege.model.BrowserSlotPattern

createGroup(String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createGroup(String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createGroupOperation() - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createGroupOperation() - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createHeaderComponent() - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

createHomeAction() - Method in class edu.stanford.smi.protege.widget.URLWidget

createHTMLBrowser(URL) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createImplementation(Cls) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

createIncludedProjectsList() - Method in class edu.stanford.smi.protege.model.KnowledgeBaseSourcesEditor

createInstance(String, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createInstance(String, Collection) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createInstance(String, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createInstance(FrameID, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createInstance(String, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createInstance(String, Collection) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createInstance(String, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createInstance(FrameID, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createInstance(FrameID, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createInstance() - Static method in class edu.stanford.smi.protege.ui.FrameRenderer

createInstance() - Static method in class edu.stanford.smi.protege.ui.SlotPairRenderer

createInstanceDisplay(Project, boolean, boolean) - Method in class edu.stanford.smi.protege.model.Project

createInstanceDisplay() - Method in class edu.stanford.smi.protege.widget.InstancesTab

createInstanceLabeledComponent() - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createInstanceList() - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createInstancesField() - Method in class edu.stanford.smi.protege.storage.clips.FileSourcesPanel

createInterface(Cls) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

createInterfaceSlotCode(PrintWriter, SlotAtClassCode) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

createInverseRelationshipPanel() - Method in class edu.stanford.smi.protege.widget.ClsesTab

createKnowledgeBase(Collection) - Method in interface edu.stanford.smi.protege.model.KnowledgeBaseFactory

createKnowledgeBase(Collection) - Method in class edu.stanford.smi.protege.storage.clips.ClipsKnowledgeBaseFactory

createKnowledgeBase(Collection) - Method in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseFactory

createKnowledgeBase(Collection) - Method in class edu.stanford.smi.protege.storage.xml.XMLKnowledgeBaseFactory

createKnowledgeBaseSourcesEditor(String, PropertyList) - Method in interface edu.stanford.smi.protege.model.KnowledgeBaseFactory

Note that this method should really take a URI for a param rather than a string.

createKnowledgeBaseSourcesEditor(String, PropertyList) - Method in class edu.stanford.smi.protege.storage.clips.ClipsKnowledgeBaseFactory

createKnowledgeBaseSourcesEditor(String, PropertyList) - Method in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseFactory

createKnowledgeBaseSourcesEditor(String, PropertyList) - Method in class edu.stanford.smi.protege.storage.xml.XMLKnowledgeBaseFactory

createLabel() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabel(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabel(Icon) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabel(Icon, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabel(String, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabel(String, Icon, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabeledScrollComponent(String, JComponent, Dimension) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLabeledScrollComponent(String, JComponent, Dimension, JComponent, Collection, JComponent) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLeftRightSplitPane() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLeftRightSplitPane(boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLeftRightSplitPane(Component, Component) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLeftRightSplitPane(Component, Component, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createLeftRightSplitPane(String, int) - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

createList(X) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

createList(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createList(Action, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createList() - Method in class edu.stanford.smi.protege.widget.ClsFieldWidget

createList() - Method in class edu.stanford.smi.protege.widget.InstanceFieldWidget

createListFinder() - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createMainComponent(Action) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

createMainFrame() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createMainSplitter() - Method in class edu.stanford.smi.protege.widget.ClsesTab

createMenu() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createMenu(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createMenu(ResourceKey) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createMenu(String, int) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createMenuItem(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createModel() - Method in class edu.stanford.smi.protege.widget.ComboBoxWidget

createModel() - Method in class edu.stanford.smi.protege.widget.ValueTypeWidget

createNarrowFrameStore(String) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

createNarrowFrameStore(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBaseFactory2

createNarrowFrameStore(String) - Method in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseFactory

createNewProject(KnowledgeBaseFactory, Collection) - Static method in class edu.stanford.smi.protege.model.Project

createNewProject(KnowledgeBaseFactory) - Method in class edu.stanford.smi.protege.plugin.AbstractCreateProjectPlugin

createNewProject(KnowledgeBaseFactory) - Method in class edu.stanford.smi.protege.storage.database.DatabaseCreateProjectPlugin

createNewProjectRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ClsClsReferenceNode

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ClsClsReferenceRoot

createNode(Object) - Method in class edu.stanford.smi.protege.ui.FormParentChildNode

createNode(Object) - Method in class edu.stanford.smi.protege.ui.FormParentChildRoot

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ParentChildNode

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ParentChildRoot

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ReferenceNode

createNode(Object) - Method in class edu.stanford.smi.protege.ui.ReferenceRoot

createNode(Object) - Method in class edu.stanford.smi.protege.ui.SlotSubslotNode

createNode(Object) - Method in class edu.stanford.smi.protege.ui.SlotSubslotRoot

createNode(Object) - Method in class edu.stanford.smi.protege.util.LazyTreeNode

createObject(KnowledgeBase, String, String, Class<? extends X>) - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

createObjectAs(KnowledgeBase, String, Class<? extends X>) - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

Creates object as the java interface passed as argument.

createOperation(String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createOperation(String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createPanel() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createPanes() - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createPasswordField() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createPopupMenu() - Method in class edu.stanford.smi.protege.ui.SubclassPane

createPrintWriter(File, boolean) - Static method in class edu.stanford.smi.protege.util.FileUtilities

CreateProject - Class in edu.stanford.smi.protege.action

Create a new project.

CreateProject(boolean) - Constructor for class edu.stanford.smi.protege.action.CreateProject

createProject() - Method in class edu.stanford.smi.protege.plugin.AbstractCreateProjectPlugin

createProject(File, Collection) - Method in interface edu.stanford.smi.protege.plugin.CreateProjectFromFilePlugin

createProject() - Method in interface edu.stanford.smi.protege.plugin.CreateProjectPlugin

createProject(String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createProject(String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createProject(RemoteServer, RemoteServerProject, RemoteSession, boolean) - Static method in class edu.stanford.smi.protege.server.RemoteClientProject

createProject(String, RemoteSession, KnowledgeBaseFactory, boolean) - Method in interface edu.stanford.smi.protege.server.RemoteServer

createProject(String, RemoteSession, KnowledgeBaseFactory, boolean) - Method in class edu.stanford.smi.protege.server.Server

CreateProjectFromFilePlugin - Interface in edu.stanford.smi.protege.plugin

A plugin that can be used to open files with a certain extension directly.

createProjectListener() - Method in class edu.stanford.smi.protege.ui.ProjectView

createProjectPathField() - Method in class edu.stanford.smi.protege.model.KnowledgeBaseSourcesEditor

CreateProjectPlugin - Interface in edu.stanford.smi.protege.plugin

A plugin that controls the creation and configuration of a Project and the possible import of existing sources files into the new project.

CreateProjectWizard - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

CreateProjectWizard(JComponent) - Constructor for class edu.stanford.smi.protege.plugin.CreateProjectWizard

createPropertyValue() - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createPropertyValue(String, String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createPropertyValue() - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createPropertyValue(String, String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createRadioButton(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createRadioButton(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createRadioButtonMenuItem(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createReader(KnowledgeBase, String, Collection) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

createReferencersAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createRelationshipPane(Action) - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createRemoteProjectShutdownListener() - Method in class edu.stanford.smi.protege.ui.ProjectView

createRemoveInstanceAction() - Method in class edu.stanford.smi.protege.ui.InstanceField

createRenderer() - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

createRoot() - Method in class edu.stanford.smi.protege.ui.FormsPanel

createRoot(KnowledgeBase) - Method in class edu.stanford.smi.protege.ui.SubslotPane

createRoot() - Method in class edu.stanford.smi.protege.widget.AbstractTreeWidget

createRuntimeClsWidget(Instance) - Method in class edu.stanford.smi.protege.model.Project

createRuntimeClsWidget(Instance, Cls) - Method in class edu.stanford.smi.protege.model.Project

createRuntimeClsWidget(Cls, Instance, Cls) - Method in class edu.stanford.smi.protege.model.Project

createRuntimeException(SQLException) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

createRuntimeWidget(Instance) - Method in class edu.stanford.smi.protege.model.Project

Deprecated. use createRuntimeClsWidget

createSaveFileChooser(String, String, String, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createScrollPane() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createScrollPane(JComponent) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createScrollPane(JTable) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectableList(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectableList(Action, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectableTable(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectableTree(Action, Cls) - Method in class edu.stanford.smi.protege.ui.SubclassPane

createSelectableTree(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectableTree(Action, LazyTreeRoot) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSelectInstanceAction() - Method in class edu.stanford.smi.protege.ui.InstanceField

createServer(String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createServer(String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createServerSocket(int) - Method in class edu.stanford.smi.protege.server.socket.RmiSocketFactory

createServerSocket(int) - Method in class edu.stanford.smi.protege.server.socket.SSLFactory

createSetDisplaySlotAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createSetDisplaySlotAction(Slot) - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createSetDisplaySlotMultipleAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createShowAllInstancesAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createShowAllRelationsAction() - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createShowRelationAction(Slot) - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createShowSubclassesAction() - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createSimpleInstance(String, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSimpleInstance(FrameID, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSimpleInstance(FrameID, Collection) - Method in interface edu.stanford.smi.protege.model.FrameFactory

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

createSimpleInstance(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createSimpleInstance(FrameID, Class) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createSimpleInstance(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.FrameCalculatorFrameStore

createSimpleInstance(FrameID, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

createSimpleInstance(FrameID, Collection, boolean, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

createSimpleInstance(FrameID, Collection, boolean, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

createSingleFormWidgetLayout(Collection) - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

createSingleItemList(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSlot(String, Cls, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSlot(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSlot(String, Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSlot(String, Cls, boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createSlot(FrameID, Collection) - Method in interface edu.stanford.smi.protege.model.FrameFactory

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

createSlot(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createSlot(FrameID, Class) - Method in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createSlot(FrameID, Collection) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

createSlot(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createSlot(String, Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createSlot(String, Cls, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createSlot(String, Cls, Collection, boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.FrameCalculatorFrameStore

createSlot(FrameID, Collection, Collection, boolean) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

createSlot(FrameID, Collection, Collection, boolean, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

createSlot(FrameID, Collection, Collection, boolean, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

createSlotDisplay() - Method in class edu.stanford.smi.protege.widget.SlotsTab

createSlotWidget(WidgetDescriptor, boolean, Project, Cls, Slot) - Static method in class edu.stanford.smi.protege.widget.WidgetUtilities

createSmallFontLabel(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSmallMap() - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

createSocket(String, int) - Method in class edu.stanford.smi.protege.server.socket.RmiSocketFactory

createSocket(String, int) - Method in class edu.stanford.smi.protege.server.socket.SSLFactory

createStandardBorder() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createSubclassPane(Action, Cls, Action, Action) - Method in class edu.stanford.smi.protege.ui.ClsesPanel

createSystemFrames() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

createTabbedPane(boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTabbedWidgetLayout(Collection) - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

createTable() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

createTable(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTable(Action) - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

createTableModel() - Method in class edu.stanford.smi.protege.widget.AbstractTableWidget

createTableModel() - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

createTabWidget(WidgetDescriptor, Project) - Static method in class edu.stanford.smi.protege.widget.WidgetUtilities

createTempFile(KnowledgeBase, String) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

createTempFile(File) - Static method in class edu.stanford.smi.protege.util.FileUtilities

createTextArea() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTextArea() - Method in class edu.stanford.smi.protege.widget.TextAreaWidget

createTextComponent() - Method in class edu.stanford.smi.protege.widget.ImageWidget

createTextComponent() - Method in class edu.stanford.smi.protege.widget.TextAreaWidget

createTextComponent() - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

createTextComponent() - Method in class edu.stanford.smi.protege.widget.TextFieldWidget

createTextComponent() - Method in class edu.stanford.smi.protege.widget.URLWidget

createTextField(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTextField() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTextField() - Method in class edu.stanford.smi.protege.widget.PasswordFieldWidget

createTextField() - Method in class edu.stanford.smi.protege.widget.TextFieldWidget

createTextPane() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createThinStandardBorder() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTitleFontLabel(String) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createToggleButton(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createToolBar() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTopBottomSplitPane(boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTopBottomSplitPane() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTopBottomSplitPane(Component, Component) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTopBottomSplitPane(Component, Component, boolean) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createTopBottomSplitPane(String, int) - Method in class edu.stanford.smi.protege.widget.AbstractTabWidget

createTree(Action) - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createUniqueFrameName(String) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. no longer needed

createUniqueFrameName(String) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Deprecated. pass "null" in as a frame name to a create method to get a gensym name

createURI(String) - Static method in class edu.stanford.smi.protege.util.URIUtilities

createUser(String, String) - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

createUser(String, String) - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

createUser(String, String) - Method in interface edu.stanford.smi.protege.server.RemoteServer

createUser(String, String) - Method in class edu.stanford.smi.protege.server.Server

createValueMap(KnowledgeBase, KnowledgeBase) - Static method in class edu.stanford.smi.protege.model.ModelUtilities

createValuesComponent(ValueType) - Method in class edu.stanford.smi.protege.widget.ValueTypeWidget

createViewAction() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

createViewAction() - Method in class edu.stanford.smi.protege.widget.URLWidget

createViewInstanceAction() - Method in class edu.stanford.smi.protege.ui.InstanceField

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.AbstractListWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.CheckBoxWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.ClsFieldWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.ComboBoxWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.InstanceFieldWidget

createWidgetConfigurationPanel() - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

createWidgetContainer(Collection) - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

createWidgetDescriptor() - Method in class edu.stanford.smi.protege.model.Project

createWidgetDescriptor(Cls, Slot, Facet) - Method in class edu.stanford.smi.protege.model.Project

createWidgetDescriptor(String) - Method in class edu.stanford.smi.protege.util.PropertyList

createWidgetDescriptor(Cls, Slot, Facet) - Method in class edu.stanford.smi.protege.widget.DefaultWidgetMapper

createWidgetDescriptor(Slot) - Method in class edu.stanford.smi.protege.widget.FormWidget

createWidgetDescriptor(Cls, Slot, Facet) - Method in interface edu.stanford.smi.protege.widget.WidgetMapper

createWidgets(KnowledgeBase, Collection) - Method in class edu.stanford.smi.protege.ui.SelectInstancesPanel

createWidgets() - Method in class edu.stanford.smi.protege.widget.FormWidget

createWindow() - Static method in class edu.stanford.smi.protege.util.ComponentFactory

createWriter(File) - Method in class edu.stanford.smi.protege.model.AbstractKnowledgeBaseFactory

CREATION_TIMESTAMP - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

CREATION_TIMESTAMP - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

CREATOR - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

CREATOR - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

curChar - Variable in class edu.stanford.smi.protege.storage.clips.ParserTokenManager

CURRENT_WORKING_DIRECTORY - Static variable in class edu.stanford.smi.protege.util.ApplicationProperties

currentToken - Variable in exception edu.stanford.smi.protege.storage.clips.ParseException

This is the last token that has been consumed successfully.

Cut - Class in edu.stanford.smi.protege.action

TODO Class Comment

Cut(boolean) - Constructor for class edu.stanford.smi.protege.action.Cut

CUT_ACTION - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

D

DATABASE_CONFIGURATION_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DATABASE_CONFIGURE_FAILED_DIALOG_CANNOT_CREATE_CONNECTION_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DATABASE_CONFIGURE_FAILED_DIALOG_DRIVER_NOT_FOUND_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DatabaseCreateProjectPlugin - Class in edu.stanford.smi.protege.storage.database

TODO Class Comment

DatabaseCreateProjectPlugin() - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseCreateProjectPlugin

DatabaseFrameDb - Interface in edu.stanford.smi.protege.storage.database

DatabaseFrameDbFactory - Class in edu.stanford.smi.protege.storage.database

Title: DatabaseFrameDbFactory

DatabaseFrameDbFactory() - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseFrameDbFactory

DatabaseKnowledgeBaseFactory - Class in edu.stanford.smi.protege.storage.database

Description of the class

DatabaseKnowledgeBaseFactory() - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseFactory

DatabaseKnowledgeBaseSourcesEditor - Class in edu.stanford.smi.protege.storage.database

Description of the class

DatabaseKnowledgeBaseSourcesEditor(String, PropertyList) - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseSourcesEditor

DatabaseParam - Class in edu.stanford.smi.protege.storage.database.pool

DatabaseParam(String, String, String, String) - Constructor for class edu.stanford.smi.protege.storage.database.pool.DatabaseParam

DatabasePlugin - Interface in edu.stanford.smi.protege.storage.database

TODO Class Comment

DatabaseProperty - Enum in edu.stanford.smi.protege.storage.database

DatabaseUtils - Class in edu.stanford.smi.protege.storage.database

DatabaseUtils() - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseUtils

DatabaseWizardPage - Class in edu.stanford.smi.protege.storage.database

TODO Class Comment

DatabaseWizardPage(Wizard, DatabasePlugin) - Constructor for class edu.stanford.smi.protege.storage.database.DatabaseWizardPage

debugBreak() - Static method in class edu.stanford.smi.protege.util.SystemUtilities

debugOutOfMemory() - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

debugStream - Variable in class edu.stanford.smi.protege.storage.clips.ParserTokenManager

Debug output.

DECREASE_FONT_SIZE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DecreaseFontSize - Class in edu.stanford.smi.protege.action

Descrease the font used by most of the widgets by one increment.

DecreaseFontSize() - Constructor for class edu.stanford.smi.protege.action.DecreaseFontSize

deepCopy(KnowledgeBase, Map) - Method in class edu.stanford.smi.protege.model.DefaultInstance

deepCopy(KnowledgeBase, Map) - Method in class edu.stanford.smi.protege.model.DefaultSlot

deepCopy(KnowledgeBase, Map) - Method in interface edu.stanford.smi.protege.model.Frame

Create a "deep copy" of the frame.

DEFAULT - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

Lexical state.

DEFAULT_ - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

DEFAULT_CACHE_MAP_SIZE - Static variable in class edu.stanford.smi.protege.util.CacheMap

Deprecated.

DEFAULT_CACHE_MAP_SIZE_PROPERTY - Static variable in class edu.stanford.smi.protege.util.CacheMap

Deprecated.

DEFAULT_CLS_JAVA_CLASS_ID - Static variable in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

DEFAULT_CLS_METACLASS_CHANGED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

DEFAULT_FACET_JAVA_CLASS_ID - Static variable in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

DEFAULT_FACET_METACLASS_CHANGED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

DEFAULT_FONT - Static variable in class edu.stanford.smi.protege.util.ProtegePlasticTheme

DEFAULT_FONT_SIZE - Static variable in class edu.stanford.smi.protege.util.ProtegePlasticTheme

DEFAULT_KEYMANAGER_ALGORITHM - Static variable in class edu.stanford.smi.protege.server.socket.SSLFactory

DEFAULT_KEYSTORE_TYPE - Static variable in class edu.stanford.smi.protege.server.socket.SSLFactory

DEFAULT_MAX_STRING_SIZE - Static variable in class edu.stanford.smi.protege.storage.database.RobustConnection

DEFAULT_SIMPLE_INSTANCE_JAVA_CLASS_ID - Static variable in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

DEFAULT_SLOT_JAVA_CLASS_ID - Static variable in class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

DEFAULT_SLOT_METACLASS_CHANGED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

DEFAULT_SLOT_VALUES_DELIMITER - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

DEFAULT_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DEFAULT_SLOTS_DELIMITER - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

DEFAULT_SSL_PROTOCOL - Static variable in class edu.stanford.smi.protege.server.socket.SSLFactory

DEFAULT_TABLE_NAME - Static variable in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseSourcesEditor

DefaultCls - Class in edu.stanford.smi.protege.model

Default implementation of Cls interface.

DefaultCls() - Constructor for class edu.stanford.smi.protege.model.DefaultCls

DefaultCls(KnowledgeBase, FrameID) - Constructor for class edu.stanford.smi.protege.model.DefaultCls

defaultClsMetaClsChanged(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

defaultClsMetaClsChanged(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

DefaultDatabaseFrameDb - Class in edu.stanford.smi.protege.storage.database

DefaultDatabaseFrameDb() - Constructor for class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

DefaultErrorHandler<X extends Throwable> - Class in edu.stanford.smi.protege.util

Default implementation of the ErrorHandler interface.

DefaultErrorHandler() - Constructor for class edu.stanford.smi.protege.util.DefaultErrorHandler

DefaultFacet - Class in edu.stanford.smi.protege.model

Default implementation of Facet interface.

DefaultFacet(KnowledgeBase, FrameID) - Constructor for class edu.stanford.smi.protege.model.DefaultFacet

DefaultFacet() - Constructor for class edu.stanford.smi.protege.model.DefaultFacet

defaultFacet(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

defaultFacetMetaClsChanged(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

defaultFacetMetaClsChanged(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

DefaultFrame - Class in edu.stanford.smi.protege.model

Default implementation of Frame interface.

DefaultFrame() - Constructor for class edu.stanford.smi.protege.model.DefaultFrame

DefaultFrameFactory - Class in edu.stanford.smi.protege.model.framestore

DefaultFrameFactory(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.model.framestore.DefaultFrameFactory

DefaultInstance - Class in edu.stanford.smi.protege.model

Default implementation of Instance interface.

DefaultInstance() - Constructor for class edu.stanford.smi.protege.model.DefaultInstance

DefaultKnowledgeBase - Class in edu.stanford.smi.protege.model

Default implementation of the KnowledgeBase interface.

DefaultKnowledgeBase(KnowledgeBaseFactory) - Constructor for class edu.stanford.smi.protege.model.DefaultKnowledgeBase

DefaultKnowledgeBase() - Constructor for class edu.stanford.smi.protege.model.DefaultKnowledgeBase

DefaultLogger - Class in edu.stanford.smi.protege.util

Default Logger implementation.

DefaultLogger() - Constructor for class edu.stanford.smi.protege.util.DefaultLogger

DefaultLogger(Writer) - Constructor for class edu.stanford.smi.protege.util.DefaultLogger

DefaultRenderer - Class in edu.stanford.smi.protege.util

Default implementation of the various renderer interfaces.

DefaultRenderer() - Constructor for class edu.stanford.smi.protege.util.DefaultRenderer

DEFAULTS - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

DEFAULTS - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

DEFAULTS - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DEFAULTS - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DefaultSimpleInstance - Class in edu.stanford.smi.protege.model

This is the concrete subclass of DefaultInstance which handles everything but classes, slots, and facets.

DefaultSimpleInstance() - Constructor for class edu.stanford.smi.protege.model.DefaultSimpleInstance

DefaultSimpleInstance(KnowledgeBase, FrameID) - Constructor for class edu.stanford.smi.protege.model.DefaultSimpleInstance

This constructor should be used by classes which use the "java_packages" feature of protege to load instances of user defined classes.

DefaultSimpleInstance(KnowledgeBase, String, Cls) - Constructor for class edu.stanford.smi.protege.model.DefaultSimpleInstance

This constructor may be called by applications that need to construct instances by calling a constructor directly rather than by calling KnowledgeBase.createInstance (for example, JESS).

DefaultSlot - Class in edu.stanford.smi.protege.model

Default implementation of Slot interface.

DefaultSlot(KnowledgeBase, FrameID) - Constructor for class edu.stanford.smi.protege.model.DefaultSlot

DefaultSlot() - Constructor for class edu.stanford.smi.protege.model.DefaultSlot

defaultSlotMetaClsChanged(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

defaultSlotMetaClsChanged(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

DefaultValueRenderer - Class in edu.stanford.smi.protege.ui

Render the slot default value facet.

DefaultValueRenderer() - Constructor for class edu.stanford.smi.protege.ui.DefaultValueRenderer

DefaultValuesConstraint - Class in edu.stanford.smi.protege.model

DefaultValuesConstraint() - Constructor for class edu.stanford.smi.protege.model.DefaultValuesConstraint

DefaultValuesWidget - Class in edu.stanford.smi.protege.widget

Widget for acquiring default values.

DefaultValuesWidget() - Constructor for class edu.stanford.smi.protege.widget.DefaultValuesWidget

DefaultWidgetLayoutStrategy - Class in edu.stanford.smi.protege.widget

This class determines the default layout of a form.

DefaultWidgetLayoutStrategy() - Constructor for class edu.stanford.smi.protege.widget.DefaultWidgetLayoutStrategy

DefaultWidgetMapper - Class in edu.stanford.smi.protege.widget

Determines the mapping between a slot and its default widget.

DefaultWidgetMapper(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.widget.DefaultWidgetMapper

DEFCLASS - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

DeferredOperationCache - Class in edu.stanford.smi.protege.server.update

Certain operations, most noteably begin/commit/rollback transaction apply to all the cache's in the RemoteClientFrameStore.

DeferredOperationCache(Cache<RemoteSession, Sft, List>, FifoReader<SerializedCacheUpdate<RemoteSession, Sft, List>>) - Constructor for class edu.stanford.smi.protege.server.update.DeferredOperationCache

DELAY_KBS_DOWNLOAD - Static variable in class edu.stanford.smi.protege.server.ServerProperties

DELAY_KBS_UPLOAD - Static variable in class edu.stanford.smi.protege.server.ServerProperties

DELAY_MSEC - Static variable in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

DELAY_MSEC - Static variable in class edu.stanford.smi.protege.server.ServerProperties

delayForLatency() - Static method in class edu.stanford.smi.protege.server.socket.SimulateDelayAspect

delayInMilliseconds() - Static method in class edu.stanford.smi.protege.server.ServerProperties

delete() - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

delete() - Method in class edu.stanford.smi.protege.model.DefaultFrame

delete() - Method in interface edu.stanford.smi.protege.model.Frame

delete(Frame) - Method in interface edu.stanford.smi.protege.util.DeletionHook

DELETE_CLASS_FAILED_DIALOG_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DeleteAction - Class in edu.stanford.smi.protege.util

Base class for the delete action that is available on most widgets.

DeleteAction(String, Selectable, Icon) - Constructor for class edu.stanford.smi.protege.util.DeleteAction

DeleteAction(String, Selectable) - Constructor for class edu.stanford.smi.protege.util.DeleteAction

DeleteAction(ResourceKey, Selectable) - Constructor for class edu.stanford.smi.protege.util.DeleteAction

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.DeleteSimplificationFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

deleteCls(Cls) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

Delete a single leaf class.

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

deleteCls(Cls) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

deleteCls(Cls) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

deleteCls(Cls) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

deleteCls(Cls, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

deleteCls(Cls, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

DeleteClsAction - Class in edu.stanford.smi.protege.action

DeleteClsAction(Selectable) - Constructor for class edu.stanford.smi.protege.action.DeleteClsAction

DeleteClsCommand - Class in edu.stanford.smi.protege.model.framestore.undo

DeleteClsCommand(FrameStore, Cls) - Constructor for class edu.stanford.smi.protege.model.framestore.undo.DeleteClsCommand

deleted(FrameEvent) - Method in class edu.stanford.smi.protege.event.FrameAdapter

DELETED - Static variable in class edu.stanford.smi.protege.event.FrameEvent

deleted(FrameEvent) - Method in interface edu.stanford.smi.protege.event.FrameListener

DeletedFrameException - Exception in edu.stanford.smi.protege.model

Exception thrown when the client calls a method on default knowledge base (directly or indirectly) and passes in a parameter which is or contains a frame that has been deleted.

DeletedFrameException(String) - Constructor for exception edu.stanford.smi.protege.model.DeletedFrameException

deleteDirectory(File) - Static method in class edu.stanford.smi.protege.util.FileUtilities

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.DeleteSimplificationFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

deleteFacet(Facet) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

deleteFacet(Facet) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

deleteFacet(Facet) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

deleteFacet(Facet, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

deleteFacet(Facet, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

deleteFrame(Frame) - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

deleteFrame(Frame) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

deleteFrame(Frame, RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

deleteFrame(Frame, RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

deleteFrame(Frame) - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

DeleteFrameCommand - Class in edu.stanford.smi.protege.model.framestore.undo

DeleteFrameCommand(FrameStore, Frame) - Constructor for class edu.stanford.smi.protege.model.framestore.undo.DeleteFrameCommand

deleteInstance(Instance) - Method in class edu.stanford.smi.protege.action.DeleteInstancesAction

deleteInstance(Instance) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteInstance(Instance) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

DeleteInstancesAction - Class in edu.stanford.smi.protege.action

Action to attempt to delete an instance.

DeleteInstancesAction(Selectable) - Constructor for class edu.stanford.smi.protege.action.DeleteInstancesAction

DeleteInstancesAction(ResourceKey, Selectable) - Constructor for class edu.stanford.smi.protege.action.DeleteInstancesAction

DeleteInstancesAction(String, Selectable) - Constructor for class edu.stanford.smi.protege.action.DeleteInstancesAction

Deprecated. Use ResourceKey version

deleteRow(int) - Method in class edu.stanford.smi.protege.widget.PropertiesTableModel

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.DeleteSimplificationFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

deleteSimpleInstance(SimpleInstance) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

deleteSimpleInstance(SimpleInstance) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

deleteSimpleInstance(SimpleInstance, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

deleteSimpleInstance(SimpleInstance, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

DeleteSimplificationFrameStore - Class in edu.stanford.smi.protege.model.framestore

DeleteSimplificationFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.DeleteSimplificationFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.ChangeMonitorFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.DeleteSimplificationFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

deleteSlot(Slot) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.ModificationRecordFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.model.framestore.undo.UndoFrameStore

deleteSlot(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

deleteSlot(Slot) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

deleteSlot(Slot, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

deleteSlot(Slot, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

DeleteSlotCommand - Class in edu.stanford.smi.protege.model.framestore.undo

DeleteSlotCommand(FrameStore, Slot) - Constructor for class edu.stanford.smi.protege.model.framestore.undo.DeleteSlotCommand

DeletionHook - Interface in edu.stanford.smi.protege.util

DeletionHookFrameStore - Class in edu.stanford.smi.protege.model.framestore

DeletionHookFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.DeletionHookFrameStore

DeletionHookUtil - Class in edu.stanford.smi.protege.util

DeletionHookUtil() - Constructor for class edu.stanford.smi.protege.util.DeletionHookUtil

dereference() - Method in class edu.stanford.smi.protege.storage.database.pool.ConnectionPool

deregister(RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.background.FrameCalculator

deregister(RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

deregister(RemoteSession) - Method in class edu.stanford.smi.protege.server.ServerProject

deregisterWindow(Window) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

DESCRIPTION - Static variable in class edu.stanford.smi.protege.storage.clips.ClipsKnowledgeBaseFactory

DESCRIPTION - Static variable in class edu.stanford.smi.protege.storage.database.DatabaseKnowledgeBaseFactory

DESCRIPTION - Static variable in class edu.stanford.smi.protege.storage.xml.XMLKnowledgeBaseFactory

DETACH_VIEW - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DetachCurrentView - Class in edu.stanford.smi.protege.action

DetachCurrentView() - Constructor for class edu.stanford.smi.protege.action.DetachCurrentView

detachCurrentView() - Method in class edu.stanford.smi.protege.ui.ProjectView

DIALOG_CONFIRM_DELETE_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DIALOG_CONFIRM_REMOVE_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DIALOG_SAVE_CHANGES_TEXT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DigestAndSalt - Class in edu.stanford.smi.protege.util

DigestAndSalt(String, String) - Constructor for class edu.stanford.smi.protege.util.DigestAndSalt

DigestedPasswordWidget - Class in edu.stanford.smi.protege.widget

DigestedPasswordWidget() - Constructor for class edu.stanford.smi.protege.widget.DigestedPasswordWidget

DIRECT_ATTACHED_CLASSES - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

Deprecated. Use #DIRECT_DOMAIN

DIRECT_DOMAIN - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_DOMAIN - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_INSTANCE_ADDED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_INSTANCE_REMOVED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_INSTANCES - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_INSTANCES - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_INSTANCES_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DIRECT_SUBCLASS_ADDED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_SUBCLASS_MOVED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_SUBCLASS_REMOVED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_SUBCLASSES - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_SUBCLASSES - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_SUBSLOT_ADDED - Static variable in class edu.stanford.smi.protege.event.SlotEvent

DIRECT_SUBSLOT_MOVED - Static variable in class edu.stanford.smi.protege.event.SlotEvent

DIRECT_SUBSLOT_REMOVED - Static variable in class edu.stanford.smi.protege.event.SlotEvent

DIRECT_SUBSLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_SUBSLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_SUPERCLASS_ADDED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_SUPERCLASS_REMOVED - Static variable in class edu.stanford.smi.protege.event.ClsEvent

DIRECT_SUPERCLASSES - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_SUPERCLASSES - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_SUPERSLOT_ADDED - Static variable in class edu.stanford.smi.protege.event.SlotEvent

DIRECT_SUPERSLOT_REMOVED - Static variable in class edu.stanford.smi.protege.event.SlotEvent

DIRECT_SUPERSLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_SUPERSLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_TEMPLATE_FACETS - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

DIRECT_TEMPLATE_FACETS - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

DIRECT_TEMPLATE_SLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_TEMPLATE_SLOTS - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

Deprecated. Use #DIRECT_TYPES

DIRECT_TYPE - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

Deprecated. Use #DIRECT_TYPES

DIRECT_TYPE_ADDED - Static variable in class edu.stanford.smi.protege.event.InstanceEvent

DIRECT_TYPE_REMOVED - Static variable in class edu.stanford.smi.protege.event.InstanceEvent

DIRECT_TYPES - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DIRECT_TYPES - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DIRECT_TYPES_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DirectDomainWidget - Class in edu.stanford.smi.protege.widget

TODO Class Comment

DirectDomainWidget() - Constructor for class edu.stanford.smi.protege.widget.DirectDomainWidget

DIRECTED_BINARY_RELATION - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

DIRECTED_BINARY_RELATION - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

directInstanceAdded(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directInstanceAdded(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directInstanceRemoved(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directInstanceRemoved(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

DirectInstancesList - Class in edu.stanford.smi.protege.ui

The panel that holds the list of direct instances of one or more classes.

DirectInstancesList(Project) - Constructor for class edu.stanford.smi.protege.ui.DirectInstancesList

DirectInstancesWidget - Class in edu.stanford.smi.protege.widget

TODO Class Comment

DirectInstancesWidget() - Constructor for class edu.stanford.smi.protege.widget.DirectInstancesWidget

DIRECTLY_INCLUDED_PROJECTS_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DirectoryClassLoader - Class in edu.stanford.smi.protege.util

DirectoryClassLoader(File, ClassLoader) - Constructor for class edu.stanford.smi.protege.util.DirectoryClassLoader

directSubclassAdded(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directSubclassAdded(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directSubclassMoved(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directSubclassMoved(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directSubclassRemoved(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directSubclassRemoved(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directSubslotAdded(SlotEvent) - Method in class edu.stanford.smi.protege.event.SlotAdapter

directSubslotAdded(SlotEvent) - Method in interface edu.stanford.smi.protege.event.SlotListener

directSubslotMoved(SlotEvent) - Method in class edu.stanford.smi.protege.event.SlotAdapter

directSubslotMoved(SlotEvent) - Method in interface edu.stanford.smi.protege.event.SlotListener

directSubslotRemoved(SlotEvent) - Method in class edu.stanford.smi.protege.event.SlotAdapter

directSubslotRemoved(SlotEvent) - Method in interface edu.stanford.smi.protege.event.SlotListener

directSuperclassAdded(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directSuperclassAdded(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directSuperclassRemoved(ClsEvent) - Method in class edu.stanford.smi.protege.event.ClsAdapter

directSuperclassRemoved(ClsEvent) - Method in interface edu.stanford.smi.protege.event.ClsListener

directSuperslotAdded(SlotEvent) - Method in class edu.stanford.smi.protege.event.SlotAdapter

directSuperslotAdded(SlotEvent) - Method in interface edu.stanford.smi.protege.event.SlotListener

directSuperslotRemoved(SlotEvent) - Method in class edu.stanford.smi.protege.event.SlotAdapter

directSuperslotRemoved(SlotEvent) - Method in interface edu.stanford.smi.protege.event.SlotListener

directTypeAdded(InstanceEvent) - Method in class edu.stanford.smi.protege.event.InstanceAdapter

directTypeAdded(InstanceEvent) - Method in interface edu.stanford.smi.protege.event.InstanceListener

directTypeRemoved(InstanceEvent) - Method in class edu.stanford.smi.protege.event.InstanceAdapter

directTypeRemoved(InstanceEvent) - Method in interface edu.stanford.smi.protege.event.InstanceListener

DirectTypesList - Class in edu.stanford.smi.protege.ui

TODO Class Comment

DirectTypesList(Project) - Constructor for class edu.stanford.smi.protege.ui.DirectTypesList

DirectTypesWidget - Class in edu.stanford.smi.protege.widget

TODO Class Comment

DirectTypesWidget() - Constructor for class edu.stanford.smi.protege.widget.DirectTypesWidget

directValues - Variable in class edu.stanford.smi.protege.util.GetOwnSlotValuesBrowserTextJob

disable() - Method in class edu.stanford.smi.protege.util.SwitchableListener

DISABLE_HEARTBEAT - Static variable in class edu.stanford.smi.protege.server.ServerProperties

disable_tracing() - Method in class edu.stanford.smi.protege.storage.clips.Parser

Disable tracing.

DISABLED_ICON - Static variable in class edu.stanford.smi.protege.util.StandardAction

disconnectFromProject(RemoteServerProject, RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

displayButton(String) - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

displayButton(Action) - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

displayErrors(String, Collection) - Method in class edu.stanford.smi.protege.ui.ProjectManager

DisplayHtml - Class in edu.stanford.smi.protege.action

Display a URL in a top level browser.

DisplayHtml(String, String) - Constructor for class edu.stanford.smi.protege.action.DisplayHtml

DisplayHtml(ResourceKey, String) - Constructor for class edu.stanford.smi.protege.action.DisplayHtml

displayPanel() - Static method in class edu.stanford.smi.protege.ui.ArchivePanel

DisplayUtilities - Class in edu.stanford.smi.protege.ui

A bunch of generic utilities for popping up dialogs that allow the user to do something.

DisplayUtilities() - Constructor for class edu.stanford.smi.protege.ui.DisplayUtilities

Disposable - Interface in edu.stanford.smi.protege.util

An interface for the dispose method that is available on components.

DisposableComponent - Class in edu.stanford.smi.protege.util

An adapter that matches the Disposable interface up to a JComponent.

DisposableComponent() - Constructor for class edu.stanford.smi.protege.util.DisposableComponent

dispose() - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

dispose() - Static method in class edu.stanford.smi.protege.code.generator.wrapping.OntologyJavaMappingUtil

dispose() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

dispose() - Method in class edu.stanford.smi.protege.model.Project

dispose() - Static method in class edu.stanford.smi.protege.model.PropertyMapUtil

dispose() - Method in class edu.stanford.smi.protege.plugin.AbstractCreateProjectPlugin

dispose() - Method in class edu.stanford.smi.protege.plugin.AbstractExportPlugin

dispose() - Method in class edu.stanford.smi.protege.plugin.AbstractPlugin

dispose() - Method in class edu.stanford.smi.protege.plugin.ProjectPluginManager

dispose() - Method in class edu.stanford.smi.protege.server.admin.ServerAdminPanel

dispose() - Method in class edu.stanford.smi.protege.server.metaproject.impl.MetaProjectImpl

dispose() - Method in interface edu.stanford.smi.protege.server.metaproject.MetaProject

dispose() - Method in class edu.stanford.smi.protege.server.RemoteClientProject

dispose(ProjectView) - Static method in class edu.stanford.smi.protege.server.util.RemoteProjectUtil

dispose() - Method in class edu.stanford.smi.protege.storage.clips.ClipsImportExportPlugin

dispose() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

dispose() - Method in class edu.stanford.smi.protege.ui.CommandHistoryPanel

dispose() - Method in class edu.stanford.smi.protege.ui.DirectInstancesList

dispose() - Method in class edu.stanford.smi.protege.ui.FormDisplay

dispose() - Method in class edu.stanford.smi.protege.ui.FormParentChildNode

dispose() - Method in class edu.stanford.smi.protege.ui.FormsPanel

dispose() - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

dispose() - Method in class edu.stanford.smi.protege.ui.InstanceField

dispose() - Method in class edu.stanford.smi.protege.ui.ParentChildNode

dispose() - Method in class edu.stanford.smi.protege.ui.SetDisplaySlotPanel

dispose() - Method in class edu.stanford.smi.protege.ui.SlotSubslotNode

dispose() - Method in class edu.stanford.smi.protege.ui.SlotSubslotRoot

dispose() - Method in class edu.stanford.smi.protege.ui.SplashScreen

dispose() - Method in class edu.stanford.smi.protege.ui.SubclassPane

dispose() - Method in class edu.stanford.smi.protege.ui.SubslotPane

dispose(Component) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

dispose() - Method in interface edu.stanford.smi.protege.util.Disposable

dispose() - Method in class edu.stanford.smi.protege.util.Frames1_8_BackwardsCompatibilityProjectFixups

dispose() - Method in class edu.stanford.smi.protege.util.LazyTreeModel

dispose() - Method in class edu.stanford.smi.protege.util.LazyTreeNode

dispose() - Method in class edu.stanford.smi.protege.util.SelectableContainer

dispose() - Method in class edu.stanford.smi.protege.util.SelectableTree

dispose() - Method in class edu.stanford.smi.protege.widget.AbstractClsWidget

dispose() - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

dispose() - Method in class edu.stanford.smi.protege.widget.AbstractTreeWidget

dispose() - Method in class edu.stanford.smi.protege.widget.AbstractWidget

dispose() - Method in class edu.stanford.smi.protege.widget.ClsFieldWidget

dispose() - Method in class edu.stanford.smi.protege.widget.ClsListWidget

dispose() - Method in class edu.stanford.smi.protege.widget.FormWidget

dispose() - Method in class edu.stanford.smi.protege.widget.InstanceFieldWidget

dispose() - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

dispose() - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

dispose() - Method in class edu.stanford.smi.protege.widget.TextComponentWidget

dispose() - Method in interface edu.stanford.smi.protege.widget.ValuesComponent

doCopy(Collection) - Method in class edu.stanford.smi.protege.ui.ClsesTreeDragSourceListener

doCopy(Collection) - Method in class edu.stanford.smi.protege.ui.SlotsTreeDragSourceListener

doCopy(JComponent, int[], Collection) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

doCopy(Collection) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

DOCUMENTATION - Static variable in interface edu.stanford.smi.protege.model.Model.Facet

DOCUMENTATION - Static variable in interface edu.stanford.smi.protege.model.Model.FacetID

DOCUMENTATION - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DOCUMENTATION - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DOCUMENTATION_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

DocumentationWidget - Class in edu.stanford.smi.protege.widget

The slot widget for displaying and editing frame documentation.

DocumentationWidget() - Constructor for class edu.stanford.smi.protege.widget.DocumentationWidget

DocumentChangedListener - Class in edu.stanford.smi.protege.util

An adapter that changes the document events that come from swing text widgets into simple "change" events.

DocumentChangedListener() - Constructor for class edu.stanford.smi.protege.util.DocumentChangedListener

doDrop(JTree, Object, int, Object) - Method in class edu.stanford.smi.protege.ui.ClsesTreeTarget

doDrop(JTree, Object, int, Object) - Method in class edu.stanford.smi.protege.ui.SlotsTreeTarget

doDrop(JList, Collection, int, Object) - Method in class edu.stanford.smi.protege.util.ListTarget

doDrop(JTree, Object, int, Object) - Method in class edu.stanford.smi.protege.util.TreeTarget

doDrop(JTree, Collection, int, Object) - Method in class edu.stanford.smi.protege.util.TreeTarget

doIt() - Method in interface edu.stanford.smi.protege.model.framestore.undo.Command

doIt() - Method in class edu.stanford.smi.protege.model.framestore.undo.DeleteFrameCommand

doIt() - Method in class edu.stanford.smi.protege.model.framestore.undo.MacroCommand

doIt() - Method in class edu.stanford.smi.protege.model.framestore.undo.ReplaceFrameCommand

doLayout() - Method in class edu.stanford.smi.protege.util.LabeledComponent

DOMAIN - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

DOMAIN - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

DOMAIN_SLOT_WIDGET_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

doMove(Collection) - Method in class edu.stanford.smi.protege.ui.ClsesTreeDragSourceListener

doMove(Collection) - Method in class edu.stanford.smi.protege.ui.SlotsTreeDragSourceListener

doMove(JComponent, int[], Collection) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

doMove(Collection) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

Done() - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Reset buffer when finished.

doOperations() - Method in class edu.stanford.smi.protege.model.Transaction

returns true if the the results of this method should be committed

doRecord(Method) - Method in class edu.stanford.smi.protege.model.framestore.JournalingFrameStoreHandler

doTabbedFormLayout() - Method in class edu.stanford.smi.protege.ui.InstanceDisplay

doTeeOuput() - Static method in class edu.stanford.smi.protege.server.socket.TeeAspect

DoubleClickActionAdapter - Class in edu.stanford.smi.protege.util

An adapter that causes the raw "mouse clicked" event to fire an action if the real event is actually a double click.

DoubleClickActionAdapter(Action) - Constructor for class edu.stanford.smi.protege.util.DoubleClickActionAdapter

DoubleClickAdapter - Class in edu.stanford.smi.protege.util

An adapter that causes the raw "mouse clicked" event to fire a double click event.

DoubleClickAdapter() - Constructor for class edu.stanford.smi.protege.util.DoubleClickAdapter

DoubleClickListener - Interface in edu.stanford.smi.protege.util

Callback interface for double-clicks

dragDropEnd(DragSourceDropEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dragDropEnd(DragSourceDropEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dragEnter(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dragEnter(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

dragEnter(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dragEnter(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.TreeTarget

dragExit(DragSourceEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dragExit(DropTargetEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

dragExit(DragSourceEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dragExit(DropTargetEvent) - Method in class edu.stanford.smi.protege.util.TreeTarget

dragGestureRecognized(DragGestureEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dragGestureRecognized(DragGestureEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dragOver(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dragOver(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

dragOver(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dragOver(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.TreeTarget

dragScroll(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

drop(DropTargetDropEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

drop(DropTargetDropEvent) - Method in class edu.stanford.smi.protege.util.TreeTarget

DROP_TARGET - Static variable in class edu.stanford.smi.protege.util.DefaultRenderer

DROP_TARGET_AREA - Static variable in class edu.stanford.smi.protege.util.DefaultRenderer

DROP_TARGET_AREA_ABOVE - Static variable in class edu.stanford.smi.protege.util.DefaultRenderer

DROP_TARGET_AREA_BELOW - Static variable in class edu.stanford.smi.protege.util.DefaultRenderer

DROP_TARGET_AREA_ON - Static variable in class edu.stanford.smi.protege.util.DefaultRenderer

dropActionChanged(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.ListDragSourceListener

dropActionChanged(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.ListTarget

dropActionChanged(DragSourceDragEvent) - Method in class edu.stanford.smi.protege.util.TreeDragSourceListener

dropActionChanged(DropTargetDragEvent) - Method in class edu.stanford.smi.protege.util.TreeTarget

dumpFrameStores() - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

dumpFrameStores() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

dumpFrameStores(Level) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

dumpListeners(Level) - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

E

EditableJavaCodeGeneratorOptions - Interface in edu.stanford.smi.protege.code.generator.wrapping

editString(Component, String, Object, Validator) - Static method in class edu.stanford.smi.protege.ui.DisplayUtilities

EditStringPanel - Class in edu.stanford.smi.protege.ui

A panel that allows the user to edit a string.

EditStringPanel(Object, String) - Constructor for class edu.stanford.smi.protege.ui.EditStringPanel

edu.stanford.smi.protege - package edu.stanford.smi.protege

edu.stanford.smi.protege.action - package edu.stanford.smi.protege.action

edu.stanford.smi.protege.code.generator.wrapping - package edu.stanford.smi.protege.code.generator.wrapping

edu.stanford.smi.protege.event - package edu.stanford.smi.protege.event

edu.stanford.smi.protege.exception - package edu.stanford.smi.protege.exception

edu.stanford.smi.protege.model - package edu.stanford.smi.protege.model

edu.stanford.smi.protege.model.framestore - package edu.stanford.smi.protege.model.framestore

edu.stanford.smi.protege.model.framestore.cleandispatch - package edu.stanford.smi.protege.model.framestore.cleandispatch

edu.stanford.smi.protege.model.framestore.undo - package edu.stanford.smi.protege.model.framestore.undo

edu.stanford.smi.protege.model.query - package edu.stanford.smi.protege.model.query

edu.stanford.smi.protege.plugin - package edu.stanford.smi.protege.plugin

edu.stanford.smi.protege.resource - package edu.stanford.smi.protege.resource

edu.stanford.smi.protege.server - package edu.stanford.smi.protege.server

edu.stanford.smi.protege.server.admin - package edu.stanford.smi.protege.server.admin

edu.stanford.smi.protege.server.framestore - package edu.stanford.smi.protege.server.framestore

edu.stanford.smi.protege.server.framestore.background - package edu.stanford.smi.protege.server.framestore.background

edu.stanford.smi.protege.server.job - package edu.stanford.smi.protege.server.job

edu.stanford.smi.protege.server.metaproject - package edu.stanford.smi.protege.server.metaproject

edu.stanford.smi.protege.server.metaproject.impl - package edu.stanford.smi.protege.server.metaproject.impl

edu.stanford.smi.protege.server.narrowframestore - package edu.stanford.smi.protege.server.narrowframestore

edu.stanford.smi.protege.server.socket - package edu.stanford.smi.protege.server.socket

edu.stanford.smi.protege.server.socket.deflate - package edu.stanford.smi.protege.server.socket.deflate

edu.stanford.smi.protege.server.update - package edu.stanford.smi.protege.server.update

edu.stanford.smi.protege.server.util - package edu.stanford.smi.protege.server.util

edu.stanford.smi.protege.storage.clips - package edu.stanford.smi.protege.storage.clips

edu.stanford.smi.protege.storage.database - package edu.stanford.smi.protege.storage.database

edu.stanford.smi.protege.storage.database.pool - package edu.stanford.smi.protege.storage.database.pool

edu.stanford.smi.protege.storage.database.stmt - package edu.stanford.smi.protege.storage.database.stmt

edu.stanford.smi.protege.storage.xml - package edu.stanford.smi.protege.storage.xml

edu.stanford.smi.protege.ui - package edu.stanford.smi.protege.ui

edu.stanford.smi.protege.util - package edu.stanford.smi.protege.util

edu.stanford.smi.protege.util.transaction - package edu.stanford.smi.protege.util.transaction

edu.stanford.smi.protege.util.transaction.cache - package edu.stanford.smi.protege.util.transaction.cache

edu.stanford.smi.protege.util.transaction.cache.impl - package edu.stanford.smi.protege.util.transaction.cache.impl

edu.stanford.smi.protege.util.transaction.cache.serialize - package edu.stanford.smi.protege.util.transaction.cache.serialize

edu.stanford.smi.protege.widget - package edu.stanford.smi.protege.widget

EMPTY_ARRAY_LIST - Static variable in class edu.stanford.smi.protege.util.CollectionUtilities

emptyCatchBlock(Throwable) - Static method in class edu.stanford.smi.protege.util.Log

emptyMapInstance(Instance) - Static method in class edu.stanford.smi.protege.model.PropertyMapUtil

enable() - Method in class edu.stanford.smi.protege.util.SwitchableListener

enable_tracing() - Method in class edu.stanford.smi.protege.storage.clips.Parser

Enable tracing.

enableAllAntialiasing(Graphics) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

enableButton(AllowableAction, boolean) - Method in class edu.stanford.smi.protege.ui.ClsesPanel

enableButtons(boolean) - Method in class edu.stanford.smi.protege.ui.ClsesPanel

enableTextAntialiasing(Graphics) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

ENCODINGS_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

EncodingsPanel - Class in edu.stanford.smi.protege.ui

EncodingsPanel() - Constructor for class edu.stanford.smi.protege.ui.EncodingsPanel

endBatch() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

endColumn - Variable in class edu.stanford.smi.protege.storage.clips.Token

The column number of the last character of this Token.

endElement(String, String, String) - Method in class edu.stanford.smi.protege.storage.xml.XMLHandler

endLine - Variable in class edu.stanford.smi.protege.storage.clips.Token

The line number of the last character of this Token.

endTransaction(boolean) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. Use #commitTransaction or #rollbackTransaction

endTransaction() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

Deprecated. Use #commitTransaction

endTransaction() - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Deprecated. Use #commitTransaction() Ends the recently opened transaction and commits the state.

endTransaction(boolean) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

Deprecated. Use #commitTransaction or #rollbackTransaction() Ends the recently opened transaction and commits or rollback based on doCommit value

endTransaction(boolean) - Method in interface edu.stanford.smi.protege.model.Storage

endTransaction() - Method in class edu.stanford.smi.protege.server.framestore.Registration

endTransaction() - Method in class edu.stanford.smi.protege.widget.AbstractWidget

Deprecated. Use commitTranscation() or rollbackTransaction()

ensureEmptyTableExists() - Method in class edu.stanford.smi.protege.storage.database.DefaultDatabaseFrameDb

ensureExtension(String, String) - Static method in class edu.stanford.smi.protege.util.FileUtilities

ensureExtension(URI, String) - Static method in class edu.stanford.smi.protege.util.URIUtilities

ensureIconFlagsLoaded() - Method in class edu.stanford.smi.protege.ui.FrameRenderer

ensureSelectionIsVisible(JList) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

enter(Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.DefaultLogger

enter(Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.LegacyLoggerImpl

enter(Object, String) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

enter(Object, String, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

enter(Object, String, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

enter(Object, String, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

enter(Object, String, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

enter(Object, String, Object, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use #getLogger().enter()

EOF - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

End of File.

eol - Variable in exception edu.stanford.smi.protege.storage.clips.ParseException

The end of line string for this machine.

EOL - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

equals(Object) - Method in class edu.stanford.smi.protege.code.generator.wrapping.AbstractWrappedInstance

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.AbstractFacetConstraint

equals(Object) - Method in class edu.stanford.smi.protege.model.BrowserSlotPattern

equals(Object) - Method in class edu.stanford.smi.protege.model.DefaultFrame

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.DefaultFrame

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

equals(Object) - Method in class edu.stanford.smi.protege.model.FrameID

equals(Object) - Method in class edu.stanford.smi.protege.model.FrameSlotCombination

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.FrameSlotCombination

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

equals(Object) - Method in class edu.stanford.smi.protege.model.framestore.Record

equals(Object) - Method in class edu.stanford.smi.protege.model.framestore.ReferenceImpl

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.framestore.ReferenceImpl

equals(Object) - Method in class edu.stanford.smi.protege.model.framestore.Sft

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.framestore.Sft

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

equals(Object, Object) - Static method in class edu.stanford.smi.protege.model.Project

EQUALS - Static variable in interface edu.stanford.smi.protege.model.query.Query

equals(Object) - Method in class edu.stanford.smi.protege.model.WidgetDescriptor

equals(Object) - Method in class edu.stanford.smi.protege.resource.ResourceKey

equals(Object) - Method in class edu.stanford.smi.protege.server.framestore.background.ClientAndFrame

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.OperationImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.PolicyControlledObjectImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.PropertyValueImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.UnbackedOperationImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.UserImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.metaproject.impl.WrappedProtegeInstanceImpl

equals(Object) - Method in class edu.stanford.smi.protege.server.Session

equals(Object) - Method in class edu.stanford.smi.protege.server.socket.RmiSocketFactory

equals(Object, Object) - Static method in class edu.stanford.smi.protege.storage.clips.ClipsFileWriter

equals(Object, Object) - Static method in class edu.stanford.smi.protege.storage.clips.Parser

equals(Object) - Method in class edu.stanford.smi.protege.storage.database.pool.DatabaseParam

equals(Object, Object) - Static method in class edu.stanford.smi.protege.ui.Finder

equals(Object, Object) - Static method in class edu.stanford.smi.protege.ui.FormDisplay

equals(Object, Object) - Static method in class edu.stanford.smi.protege.ui.InstanceDisplay

equals(Object) - Method in class edu.stanford.smi.protege.util.AbstractEvent

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.AbstractEvent

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.DefaultRenderer

equals(Object) - Method in class edu.stanford.smi.protege.util.FrameWithBrowserText

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.LazyTreeNode

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.ListenerCollection

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.SelectableContainer

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.StandardAction

equals(Object, Object) - Static method in class edu.stanford.smi.protege.util.SystemUtilities

equals(Object) - Method in class edu.stanford.smi.protege.util.transaction.cache.CacheResult

equals(Object, Object) - Static method in class edu.stanford.smi.protege.widget.AbstractWidget

equalsList(Collection<?>, Collection<?>) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

equalsSet(Collection, Collection) - Static method in class edu.stanford.smi.protege.util.CollectionUtilities

error(SAXParseException) - Method in class edu.stanford.smi.protege.storage.xml.XMLHandler

error(X) - Method in class edu.stanford.smi.protege.util.DefaultErrorHandler

error(String, Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.DefaultLogger

error(E) - Method in interface edu.stanford.smi.protege.util.ErrorHandler

Receive notification of a recoverable error.

error(String, Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.LegacyLoggerImpl

error(String, Object, String) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

error(String, Object, String, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

error(String, Object, String, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

error(String, Object, String, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

error(String, Object, String, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

error(String, Object, String, Object, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

ERROR_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

ErrorHandler<E extends Throwable> - Interface in edu.stanford.smi.protege.util

Basic interface for Protege error handlers.

ERRORS_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

escape(char) - Static method in class edu.stanford.smi.protege.storage.xml.XMLUtil

If there is a suitable entity reference for this character, return it.

escape(String) - Static method in class edu.stanford.smi.protege.storage.xml.XMLUtil

Escapes a string so it may be returned as text content or attribute value.

Event - Interface in edu.stanford.smi.protege.event

EventDispatcher - Interface in edu.stanford.smi.protege.util

Interface for a generic dispatcher of events.

EventDispatchFrameStore - Class in edu.stanford.smi.protege.model.framestore

EventDispatchFrameStore(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

EventGeneratorFrameStore - Class in edu.stanford.smi.protege.model.framestore

EventGeneratorFrameStore(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.model.framestore.EventGeneratorFrameStore

EventSinkFrameStore - Class in edu.stanford.smi.protege.model.framestore

EventSinkFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.EventSinkFrameStore

exception(Throwable, Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.DefaultLogger

exception(Throwable, Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.LegacyLoggerImpl

exception(Throwable, Object, String) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

exception(Throwable, Object, String, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

exception(Throwable, Object, String, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

exception(Throwable, Object, String, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

exception(Throwable, Object, String, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

exception(Throwable, Object, String, Object, Object, Object, Object, Object) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().severe();

EXCLUSIVE - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

ExclusiveRunnable - Class in edu.stanford.smi.protege.util

This class is a Runnable that only allows one thread to be executing at a time.

ExclusiveRunnable() - Constructor for class edu.stanford.smi.protege.util.ExclusiveRunnable

exclusiveTransaction() - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

exclusiveTransaction() - Method in class edu.stanford.smi.protege.util.transaction.TransactionMonitor

execute() - Method in class edu.stanford.smi.protege.model.Transaction

returns true if the transaction was committed This method handles the logic of executing a transaction, including the necessary synchronization.

execute() - Method in class edu.stanford.smi.protege.util.ExclusiveRunnable

This method is where the developer implements his own execute procedure.

execute() - Method in class edu.stanford.smi.protege.util.GetInstancesAndBrowserTextJob

execute() - Method in class edu.stanford.smi.protege.util.GetOwnSlotValuesBrowserTextJob

execute() - Method in class edu.stanford.smi.protege.util.ProtegeJob

This method will either execute the job.run() method or - in the case that the caller is a client to a Protege server - it will copy this job to the server so that it can execute there.

execute() - Method in class edu.stanford.smi.protege.util.ServerJob

execute() - Method in class edu.stanford.smi.protege.util.Wizard

executeProtegeJob(ProtegeJob) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

executeProtegeJob(ProtegeJob, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

executeProtegeJob(ProtegeJob, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

executeQuery(Query) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.AbstractFrameStoreInvocationHandler

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.ArgumentCheckingFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.CallCachingFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.ClosureCachingBasicFrameStore

executeQuery(Query, QueryCallback) - Method in interface edu.stanford.smi.protege.model.framestore.FrameStore

The executeQuery method allows for complex queries.

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesNarrowFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.InMemoryFrameDb

TODO implement executeQuery

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.JournalingFrameStoreHandler

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.ModificationFrameStore

executeQuery(Query, QueryCallback) - Method in interface edu.stanford.smi.protege.model.framestore.NarrowFrameStore

The executeQuery method allows for complex queries.

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.PlaceHolderNarrowFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.ReadOnlyFrameStoreHandler

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.SimpleFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.TemplateFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.model.framestore.TraceFrameStoreHandler

executeQuery(Query) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.server.framestore.LastUsageInvocationHandler

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.server.framestore.LocalizeFrameStoreHandler

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.server.framestore.ReadAccessEnforcementFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

executeQuery(Query, RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

executeQuery(Query, RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

executeQuery(Query, RemoteSession) - Method in interface edu.stanford.smi.protege.server.narrowframestore.RemoteServerNarrowFrameStore

executeQuery(Query, RemoteSession) - Method in class edu.stanford.smi.protege.server.narrowframestore.ServerNarrowFrameStore

executeQuery(PreparedStatement) - Static method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

executeQuery(String) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

executeQuery(String, int) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.storage.database.IdleConnectionNarrowFrameStore

executeQuery(Query, QueryCallback) - Method in class edu.stanford.smi.protege.storage.database.ValueCachingNarrowFrameStore

executeServerJob(ServerJob, RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServer

executeServerJob(ServerJob, RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

executeUpdate(PreparedStatement) - Static method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

executeUpdate(String) - Method in class edu.stanford.smi.protege.storage.database.AbstractDatabaseFrameDb

existsTransaction() - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

existsTransaction() - Method in class edu.stanford.smi.protege.util.transaction.TransactionMonitor

exit(Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.DefaultLogger

exit(Object, String, Object[]) - Method in class edu.stanford.smi.protege.util.LegacyLoggerImpl

exit(Object, String) - Static method in class edu.stanford.smi.protege.util.Log

Deprecated. Use getLogger().exiting();

exit() - Static method in class edu.stanford.smi.protege.util.SystemUtilities

ExitApplication - Class in edu.stanford.smi.protege.action

Request that the application exit.

ExitApplication() - Constructor for class edu.stanford.smi.protege.action.ExitApplication

exitApplicationRequest() - Method in class edu.stanford.smi.protege.ui.ProjectManager

expandAll() - Method in class edu.stanford.smi.protege.widget.AbstractTreeWidget

ExpandBuff(boolean) - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

expandRoot() - Method in class edu.stanford.smi.protege.widget.AbstractTreeWidget

expectedTokenSequences - Variable in exception edu.stanford.smi.protege.storage.clips.ParseException

Each entry in this array is an array of integers.

expired() - Method in class edu.stanford.smi.protege.server.framestore.background.WorkInfo

export() - Method in class edu.stanford.smi.protege.action.ExportToCsvAction

EXPORT_BROWSER_TEXT_PROPERTY - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

EXPORT_FILE_EXTENSION - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_FILE_EXTENSION_PROPERTY - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_FILE_PREFIX - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_FILE_PREFIX_PROPERTY - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_METADATA_PROPERTY - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_SUPERCLASS_PROPERTY - Static variable in class edu.stanford.smi.protege.action.ExportToCsvUtil

EXPORT_TO_CSV_OPERATION - Static variable in class edu.stanford.smi.protege.action.ExportToCsvAction

exportCompletedSuccessful() - Method in class edu.stanford.smi.protege.action.ExportToCsvAction

ExportConfigurationPanel - Class in edu.stanford.smi.protege.ui

ExportConfigurationPanel(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.ui.ExportConfigurationPanel

ExportPlugin - Interface in edu.stanford.smi.protege.plugin

ExportPluginAction - Class in edu.stanford.smi.protege.action

Action to build a project from component pieces (files)

ExportPluginAction(ExportPlugin) - Constructor for class edu.stanford.smi.protege.action.ExportPluginAction

exportProject(Project) - Method in interface edu.stanford.smi.protege.plugin.ExportProjectPlugin

exportProject(Project) - Method in class edu.stanford.smi.protege.storage.clips.ClipsFilesExportProjectPlugin

ExportProjectPlugin - Interface in edu.stanford.smi.protege.plugin

A plugin that controls the export of all or part of a knowledge to "somewhere else".

exportProjectRequest(ExportPlugin) - Method in class edu.stanford.smi.protege.ui.ProjectManager

exportProjectToNewFormat(Project) - Method in class edu.stanford.smi.protege.plugin.AbstractBackendExportPlugin

ExportToCsvAction - Class in edu.stanford.smi.protege.action

This action class allows the export of an instance list to a CSV file.

ExportToCsvAction(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.action.ExportToCsvAction

ExportToCsvAction(KnowledgeBase, String, Icon) - Constructor for class edu.stanford.smi.protege.action.ExportToCsvAction

ExportToCsvUtil - Class in edu.stanford.smi.protege.action

Utility methods for getting/setting the configuration parameters for the export to CSV action (See ExportToCsvAction).

ExportToCsvUtil() - Constructor for class edu.stanford.smi.protege.action.ExportToCsvUtil

ExportWizard - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

ExportWizard(JComponent, Project) - Constructor for class edu.stanford.smi.protege.plugin.ExportWizard

ExportWizardPage - Class in edu.stanford.smi.protege.plugin

TODO Class Comment

ExportWizardPage(String, ExportWizard) - Constructor for class edu.stanford.smi.protege.plugin.ExportWizardPage

extendSelection(Cls) - Method in class edu.stanford.smi.protege.ui.SubclassPane

extendSelection(Slot) - Method in class edu.stanford.smi.protege.ui.SubslotPane

extendSelection(JTree, Object) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

EXTENSION - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

EXTENSION_SEPARATOR - Static variable in class edu.stanford.smi.protege.util.FileUtilities

ExtensionFilter - Class in edu.stanford.smi.protege.util

A file filter the works on a particular extension.

ExtensionFilter(Iterator<String>, String) - Constructor for class edu.stanford.smi.protege.util.ExtensionFilter

ExtensionFilter(String, String) - Constructor for class edu.stanford.smi.protege.util.ExtensionFilter

EXTRA_MANIFEST_PATH - Static variable in class edu.stanford.smi.protege.plugin.PluginUtilities

EXTRA_MANIFEST_PATH - Static variable in class edu.stanford.smi.protege.util.ApplicationProperties

extractMetaProjectLocation(String) - Method in class edu.stanford.smi.protege.server.Server

F

Facet - Interface in edu.stanford.smi.protege.model

A description of a constraint on the value of a frame-slot binding.

FACET - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

FACET - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

facet(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

FACET - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.ElementName

FACET_CREATE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FACET_CREATED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

FACET_DELETE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FACET_DELETED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

FACET_REFERENCE - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.ElementName

FACET_TYPE - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.AttributeValue

FACET_VIEW - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FACET_VIEW_REFERENCES - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FacetCheckingFrameStore - Class in edu.stanford.smi.protege.model.framestore

FacetCheckingFrameStore() - Constructor for class edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore

FacetCheckingFrameStore.AbstractClassException - Exception in edu.stanford.smi.protege.model.framestore

FacetCheckingFrameStore.AbstractClassException() - Constructor for exception edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore.AbstractClassException

FacetCheckingFrameStore.FacetException - Exception in edu.stanford.smi.protege.model.framestore

FacetCheckingFrameStore.FacetException() - Constructor for exception edu.stanford.smi.protege.model.framestore.FacetCheckingFrameStore.FacetException

FacetConstraint - Interface in edu.stanford.smi.protege.model

Programmatic implementation of the constraint expressed by a specific facet.

facetCreated(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

facetCreated(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

facetDeleted(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

facetDeleted(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

FacetEvent - Class in edu.stanford.smi.protege.event

Event generated when a facet changes.

FacetEvent(Facet, int, Frame, Slot) - Constructor for class edu.stanford.smi.protege.event.FacetEvent

FacetEventDispatcher - Class in edu.stanford.smi.protege.event

Dispatcher to send Facet events to FacetListeners

FacetEventDispatcher() - Constructor for class edu.stanford.smi.protege.event.FacetEventDispatcher

FacetListener - Interface in edu.stanford.smi.protege.event

Listener interface for facet events

facetName() - Method in class edu.stanford.smi.protege.storage.clips.Parser

facetStatement(Cls, Slot) - Method in class edu.stanford.smi.protege.storage.clips.Parser

FACTORY_CLASS_NAME - Static variable in class edu.stanford.smi.protege.code.generator.wrapping.ProjectBasedJavaCodeGeneratorOptions

FACTORY_CLASS_NAME - Static variable in interface edu.stanford.smi.protege.model.KnowledgeBaseFactory

FactoryRenderer - Class in edu.stanford.smi.protege.ui

TODO Class Comment

FactoryRenderer() - Constructor for class edu.stanford.smi.protege.ui.FactoryRenderer

fail(String) - Static method in class edu.stanford.smi.protege.util.Assert

FALSE - Static variable in class edu.stanford.smi.protege.storage.clips.ClipsUtil

fatalError(SAXParseException) - Method in class edu.stanford.smi.protege.storage.xml.XMLHandler

fatalError(X) - Method in class edu.stanford.smi.protege.util.DefaultErrorHandler

fatalError(E) - Method in interface edu.stanford.smi.protege.util.ErrorHandler

Receive notification of an unrecoverable error.

FifoReader<X> - Class in edu.stanford.smi.protege.server.util

FifoReader(FifoWriter<X>) - Constructor for class edu.stanford.smi.protege.server.util.FifoReader

FifoReader(FifoReader<X>) - Constructor for class edu.stanford.smi.protege.server.util.FifoReader

FifoWriter<X> - Class in edu.stanford.smi.protege.server.util

This is the writer part of a pair of linked classes, the FifoWriter and the FifoReader.

FifoWriter() - Constructor for class edu.stanford.smi.protege.server.util.FifoWriter

FILE_CARD - Static variable in class edu.stanford.smi.protege.util.ProjectChooser

FILE_NAME - Static variable in class edu.stanford.smi.protege.code.generator.wrapping.ProjectBasedJavaCodeGeneratorOptions

FILE_NAME - Static variable in class edu.stanford.smi.protege.util.ApplicationProperties

FileField - Class in edu.stanford.smi.protege.util

A text field that accepts a file name.

FileField(String, String, String, String) - Constructor for class edu.stanford.smi.protege.util.FileField

Constructor for selecting a file

FileField(String, String, ExtensionFilter) - Constructor for class edu.stanford.smi.protege.util.FileField

Constructor for selecting a file with multiple extension filters

FileField(String, String, String) - Constructor for class edu.stanford.smi.protege.util.FileField

Constructor for selecting a directory

FileFormatter - Class in edu.stanford.smi.protege.util

TODO Class Comment

FileFormatter() - Constructor for class edu.stanford.smi.protege.util.FileFormatter

FileHandler - Class in edu.stanford.smi.protege.util

FileHandler() - Constructor for class edu.stanford.smi.protege.util.FileHandler

FileList - Class in edu.stanford.smi.protege.util

A list box that is specialized to work with file names.

FileList(String, Collection, String, String) - Constructor for class edu.stanford.smi.protege.util.FileList

Files - Class in edu.stanford.smi.protege.resource

Utility class for accessing files in protege jar.

Files() - Constructor for class edu.stanford.smi.protege.resource.Files

FileSourcesPanel - Class in edu.stanford.smi.protege.storage.clips

Panel which contains the fields needed for the Clips backend.

FileSourcesPanel(String, PropertyList) - Constructor for class edu.stanford.smi.protege.storage.clips.FileSourcesPanel

FileSourcesPanel - Class in edu.stanford.smi.protege.storage.xml

Panel which contains the fields needed for the XML backend.

FileSourcesPanel(String, PropertyList) - Constructor for class edu.stanford.smi.protege.storage.xml.FileSourcesPanel

FileUtilities - Class in edu.stanford.smi.protege.util

A utility class for working with files.

FileUtilities() - Constructor for class edu.stanford.smi.protege.util.FileUtilities

FillBuff() - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

fillBuffer(PacketHeader) - Method in class edu.stanford.smi.protege.server.socket.deflate.CompressingInputStream

fillBuffer(PacketHeader) - Method in class edu.stanford.smi.protege.server.socket.deflate.HybridCompressingInputStream

FILLING_HORIZONTALLY - Static variable in class edu.stanford.smi.protege.util.ResizingLayout

FILLING_VERTICALLY - Static variable in class edu.stanford.smi.protege.util.ResizingLayout

filterHiddenRoots(Collection<X>) - Method in class edu.stanford.smi.protege.util.TreeSelectionHelper

findClass(String) - Method in class edu.stanford.smi.protege.util.MultiplexingClassLoader

Finder - Class in edu.stanford.smi.protege.ui

A generic base class for the "find box" ui feature.

Finder(String) - Constructor for class edu.stanford.smi.protege.ui.Finder

Finder(String, Icon) - Constructor for class edu.stanford.smi.protege.ui.Finder

Finder(ResourceKey) - Constructor for class edu.stanford.smi.protege.ui.Finder

findPluginsDirectory() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

findResource(String) - Method in class edu.stanford.smi.protege.util.DirectoryClassLoader

findResource(String) - Method in class edu.stanford.smi.protege.util.MultiplexingClassLoader

findResources(String) - Method in class edu.stanford.smi.protege.util.MultiplexingClassLoader

finishCompleteCache() - Method in class edu.stanford.smi.protege.server.update.DeferredOperationCache

finishCompleteCache() - Method in interface edu.stanford.smi.protege.util.transaction.cache.Cache

The startCompleteCache and the finishCompleteCache are part of a protocol.

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.InvalidatableCache

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadCommittedCache

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadUncommittedCache

finishCompleteCache() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.RepeatableReadCache

firePropertyChange(String, boolean, boolean) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, byte, byte) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, char, char) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, double, double) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, float, float) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, int, int) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, long, long) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, short, short) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

firePropertyChange(String, Object, Object) - Method in class edu.stanford.smi.protege.util.DefaultRenderer

fix(KnowledgeBase) - Static method in class edu.stanford.smi.protege.util.Frames1_8_BackwardsCompatibilityProjectFixups

fixLoader() - Method in class edu.stanford.smi.protege.util.ProtegeJob

fixLoader() - Method in class edu.stanford.smi.protege.util.RemoteJob

fixLoader() - Method in class edu.stanford.smi.protege.util.ServerJob

fixMetaProject(MetaProject) - Static method in class edu.stanford.smi.protege.server.util.ServerUtil

Backwards compatibility check for the metaproject.

fixProject(KnowledgeBase) - Method in interface edu.stanford.smi.protege.plugin.ProjectFixupPlugin

fixProject(KnowledgeBase) - Static method in class edu.stanford.smi.protege.plugin.ProjectFixupsPluginManager

fixProject(KnowledgeBase) - Method in class edu.stanford.smi.protege.util.Frames1_8_BackwardsCompatibilityProjectFixups

FLOAT - Static variable in interface edu.stanford.smi.protege.model.Model.Cls

FLOAT - Static variable in interface edu.stanford.smi.protege.model.Model.ClsID

FLOAT - Static variable in class edu.stanford.smi.protege.model.ValueType

FLOAT - Static variable in interface edu.stanford.smi.protege.storage.clips.ParserConstants

RegularExpression Id.

FLOAT_TYPE - Static variable in interface edu.stanford.smi.protege.storage.xml.XMLString.AttributeValue

FloatFieldWidget - Class in edu.stanford.smi.protege.widget

Slot widget for acquiring and displaying a floating point value.

FloatFieldWidget() - Constructor for class edu.stanford.smi.protege.widget.FloatFieldWidget

FloatListWidget - Class in edu.stanford.smi.protege.widget

Slot widget for acquiring and displaying a list of floating point values.

FloatListWidget() - Constructor for class edu.stanford.smi.protege.widget.FloatListWidget

FloatValidator - Class in edu.stanford.smi.protege.util

Utility class to check a string to see if it is a valid floating point number

FloatValidator() - Constructor for class edu.stanford.smi.protege.util.FloatValidator

flush() - Method in class edu.stanford.smi.protege.server.socket.deflate.CompressingOutputStream

flush() - Method in class edu.stanford.smi.protege.server.socket.deflate.HybridCompressingOutputStream

flush() - Method in class edu.stanford.smi.protege.server.socket.MonitoringOutputStream

flush() - Method in class edu.stanford.smi.protege.server.socket.TeeOutputStream

flush() - Method in class edu.stanford.smi.protege.server.update.DeferredOperationCache

flush() - Method in class edu.stanford.smi.protege.storage.clips.ClipsFileWriter

flush() - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

flush() - Method in interface edu.stanford.smi.protege.util.transaction.cache.Cache

Try to avoid this.

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.BasicCache

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.CompleteableCache

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.InvalidatableCache

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadCommittedCache

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.ReadUncommittedCache

flush() - Method in class edu.stanford.smi.protege.util.transaction.cache.impl.RepeatableReadCache

flushCache() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

flushCache() - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

flushCache() - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

flushEvents() - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

flushEvents() - Method in class edu.stanford.smi.protege.model.framestore.EventDispatchFrameStore

flushEvents() - Method in class edu.stanford.smi.protege.model.framestore.FrameStoreManager

flushEvents() - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

FontAction - Class in edu.stanford.smi.protege.action

Base class for any action to change the application font sizes.

FontAction(ResourceKey) - Constructor for class edu.stanford.smi.protege.action.FontAction

FORM_BROWSER_FORMS_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_BROWSER_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_CHANGED - Static variable in class edu.stanford.smi.protege.event.ProjectEvent

FORM_EDITOR_DISPLAY_SLOT_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_EDITOR_SELECT_A_WIDGET_PROMPT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_EDITOR_SELECT_NO_WIDGET - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_EDITOR_SELECTED_WIDGET_TYPE_LABEL - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_EDITOR_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_LAYOUT_LIKE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_RELAYOUT - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_REMOVE_CUSTOMIZATIONS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_SEARCH_FOR - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FORM_VIEW_CUSTOMIZATIONS - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

format(LogRecord) - Method in class edu.stanford.smi.protege.model.framestore.JournalFormater

format(LogRecord, String, boolean, boolean) - Method in class edu.stanford.smi.protege.util.AbstractFormatter

format(LogRecord, String, boolean, boolean, boolean, boolean) - Method in class edu.stanford.smi.protege.util.AbstractFormatter

format(LogRecord) - Method in class edu.stanford.smi.protege.util.ConsoleFormatter

format(LogRecord) - Method in class edu.stanford.smi.protege.util.FileFormatter

formChanged(ProjectEvent) - Method in class edu.stanford.smi.protege.event.ProjectAdapter

formChanged(ProjectEvent) - Method in interface edu.stanford.smi.protege.event.ProjectListener

FormDisplay - Class in edu.stanford.smi.protege.ui

A panel that holds a design time class form and allows the user to set the browser text and change slot widgets.

FormDisplay(Project) - Constructor for class edu.stanford.smi.protege.ui.FormDisplay

FormParentChildNode - Class in edu.stanford.smi.protege.ui

TreeNode to hold the parent form - child form relationship.

FormParentChildNode(LazyTreeNode, Cls) - Constructor for class edu.stanford.smi.protege.ui.FormParentChildNode

FormParentChildRoot - Class in edu.stanford.smi.protege.ui

Root for a set to nodes to hold the parent form - child form relationship.

FormParentChildRoot(Cls) - Constructor for class edu.stanford.smi.protege.ui.FormParentChildRoot

FormParentChildRoot(Collection) - Constructor for class edu.stanford.smi.protege.ui.FormParentChildRoot

FormRenderer - Class in edu.stanford.smi.protege.ui

Renderer for nodes on the "form tree".

FormRenderer(Project) - Constructor for class edu.stanford.smi.protege.ui.FormRenderer

FORMS_VIEW_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FormsPanel - Class in edu.stanford.smi.protege.ui

The panel that holds the "forms hierarchy" on the Forms tab.

FormsPanel(Project) - Constructor for class edu.stanford.smi.protege.ui.FormsPanel

FormsTab - Class in edu.stanford.smi.protege.widget

Tab to display class forms and allow the user to edit the forms.

FormsTab() - Constructor for class edu.stanford.smi.protege.widget.FormsTab

FormWidget - Class in edu.stanford.smi.protege.widget

The default implementation of ClsWidget.

FormWidget() - Constructor for class edu.stanford.smi.protege.widget.FormWidget

FormWidgetConfigurationLayoutTab - Class in edu.stanford.smi.protege.widget

Layout configuration panel for a FormWidget.

FormWidgetConfigurationLayoutTab(FormWidget) - Constructor for class edu.stanford.smi.protege.widget.FormWidgetConfigurationLayoutTab

FormWidgetConfigurationPanel - Class in edu.stanford.smi.protege.widget

Configuration panel for a form widget.

FormWidgetConfigurationPanel(FormWidget) - Constructor for class edu.stanford.smi.protege.widget.FormWidgetConfigurationPanel

FormWidgetConfigurationWidgetsTab - Class in edu.stanford.smi.protege.widget

Tab for configuring which slots appear on a form widget.

FormWidgetConfigurationWidgetsTab(FormWidget) - Constructor for class edu.stanford.smi.protege.widget.FormWidgetConfigurationWidgetsTab

forName(String) - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

forName(String, boolean) - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

Load a class with the given name.

forName(String) - Static method in class edu.stanford.smi.protege.util.SystemUtilities

forName(String, boolean) - Static method in class edu.stanford.smi.protege.util.SystemUtilities

Frame - Interface in edu.stanford.smi.protege.model

A container for slot and facet values.

frame - Variable in class edu.stanford.smi.protege.util.GetOwnSlotValuesBrowserTextJob

FRAME_EDITOR_FRAME_NAME - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FRAME_EDITOR_FRAME_TYPE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FRAME_EDITOR_FRAME_TYPE_AND_NAME - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

FRAME_NAME_CHANGED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

Deprecated.

FRAME_REPLACED - Static variable in class edu.stanford.smi.protege.event.KnowledgeBaseEvent

FRAME_SLOT_REFERENCE_ADDED - Static variable in class edu.stanford.smi.protege.event.FacetEvent

FRAME_SLOT_REFERENCE_REMOVED - Static variable in class edu.stanford.smi.protege.event.FacetEvent

FrameAdapter - Class in edu.stanford.smi.protege.event

Adapter for frame listeners.

FrameAdapter() - Constructor for class edu.stanford.smi.protege.event.FrameAdapter

FrameCalculator - Class in edu.stanford.smi.protege.server.framestore.background

This class is a thread that precalculates frames needed by a client.

FrameCalculator(FrameStore, ServerCacheStateMachine, Object, ServerFrameStore, Map<RemoteSession, Registration>) - Constructor for class edu.stanford.smi.protege.server.framestore.background.FrameCalculator

FrameCalculator.FrameCalculatorStatsImpl - Class in edu.stanford.smi.protege.server.framestore.background

FrameCalculator.FrameCalculatorStatsImpl() - Constructor for class edu.stanford.smi.protege.server.framestore.background.FrameCalculator.FrameCalculatorStatsImpl

FrameCalculatorFrameStore - Class in edu.stanford.smi.protege.server.framestore

This class informs the frame calculator of items that the client may want cached during normal knowledge base operations.

FrameCalculatorFrameStore(FrameCalculator) - Constructor for class edu.stanford.smi.protege.server.framestore.FrameCalculatorFrameStore

FrameCalculatorStats - Interface in edu.stanford.smi.protege.server.framestore.background

FrameComparator<X extends Frame> - Class in edu.stanford.smi.protege.ui

Comparator for frames.

FrameComparator() - Constructor for class edu.stanford.smi.protege.ui.FrameComparator

FrameCounts - Interface in edu.stanford.smi.protege.model

FrameCountsImpl - Class in edu.stanford.smi.protege.model

FrameCountsImpl() - Constructor for class edu.stanford.smi.protege.model.FrameCountsImpl

FrameEvent - Class in edu.stanford.smi.protege.event

Event generated when a frame changes.

FrameEvent(Frame, int) - Constructor for class edu.stanford.smi.protege.event.FrameEvent

FrameEvent(Frame, int, Object) - Constructor for class edu.stanford.smi.protege.event.FrameEvent

FrameEvent(Frame, int, Object, Object) - Constructor for class edu.stanford.smi.protege.event.FrameEvent

FrameFactory - Interface in edu.stanford.smi.protege.model

FrameHolder - Class in edu.stanford.smi.protege.storage.database

FrameHolder(FrameFactory) - Constructor for class edu.stanford.smi.protege.storage.database.FrameHolder

FrameID - Class in edu.stanford.smi.protege.model

FrameID(String) - Constructor for class edu.stanford.smi.protege.model.FrameID

FrameListener - Interface in edu.stanford.smi.protege.event

Listener interface for frame events.

frameNameChanged(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

Deprecated.

frameNameChanged(KnowledgeBaseEvent) - Method in interface edu.stanford.smi.protege.event.KnowledgeBaseListener

This method should be called frameReplaced().

FrameNameComparator - Class in edu.stanford.smi.protege.ui

A comparator for frames that only does a case insensitive comparison of the frame names.

FrameNameComparator() - Constructor for class edu.stanford.smi.protege.ui.FrameNameComparator

FrameNameValidator - Interface in edu.stanford.smi.protege.model

FrameRenderer - Class in edu.stanford.smi.protege.ui

Renderer for frames.

FrameRenderer() - Constructor for class edu.stanford.smi.protege.ui.FrameRenderer

FrameRenderer.InstanceCountType - Enum in edu.stanford.smi.protege.ui

frameReplaced(FrameEvent) - Method in class edu.stanford.smi.protege.event.FrameAdapter

frameReplaced(KnowledgeBaseEvent) - Method in class edu.stanford.smi.protege.event.KnowledgeBaseAdapter

Frames1_8_BackwardsCompatibilityProjectFixups - Class in edu.stanford.smi.protege.util

Fix backwards compatibility problems in the .pprj files.

Frames1_8_BackwardsCompatibilityProjectFixups() - Constructor for class edu.stanford.smi.protege.util.Frames1_8_BackwardsCompatibilityProjectFixups

FrameSlotCombination - Class in edu.stanford.smi.protege.model

A holder for a frame-slot pair.

FrameSlotCombination(Frame, Slot) - Constructor for class edu.stanford.smi.protege.model.FrameSlotCombination

FrameSlotPairComparator - Class in edu.stanford.smi.protege.ui

Comparator for the "frame slot pairs" that are displayed in the template slot window.

FrameSlotPairComparator() - Constructor for class edu.stanford.smi.protege.ui.FrameSlotPairComparator

frameSlotReferenceAdded(FacetEvent) - Method in interface edu.stanford.smi.protege.event.FacetListener

frameSlotReferenceRemoved(FacetEvent) - Method in interface edu.stanford.smi.protege.event.FacetListener

FrameStore - Interface in edu.stanford.smi.protege.model.framestore

FrameStoreAdapter - Class in edu.stanford.smi.protege.model.framestore

FrameStoreAdapter() - Constructor for class edu.stanford.smi.protege.model.framestore.FrameStoreAdapter

FrameStoreManager - Class in edu.stanford.smi.protege.model.framestore

FrameStoreManager(KnowledgeBase) - Constructor for class edu.stanford.smi.protege.model.framestore.FrameStoreManager

FrameStoreMethodInvoker - Class in edu.stanford.smi.protege.model.framestore

FrameStoreMethodInvoker() - Constructor for class edu.stanford.smi.protege.model.framestore.FrameStoreMethodInvoker

FrameTreeFinder - Class in edu.stanford.smi.protege.ui

FrameTreeFinder(KnowledgeBase, JTree, ResourceKey) - Constructor for class edu.stanford.smi.protege.ui.FrameTreeFinder

FrameTreeFinder(KnowledgeBase, JTree, String) - Constructor for class edu.stanford.smi.protege.ui.FrameTreeFinder

FrameTreeFinder(KnowledgeBase, JTree, String, Icon) - Constructor for class edu.stanford.smi.protege.ui.FrameTreeFinder

FrameWithBrowserText - Class in edu.stanford.smi.protege.util

FrameWithBrowserText(Frame) - Constructor for class edu.stanford.smi.protege.util.FrameWithBrowserText

FrameWithBrowserText(Frame, String) - Constructor for class edu.stanford.smi.protege.util.FrameWithBrowserText

FrameWithBrowserText(Frame, String, Collection<Cls>) - Constructor for class edu.stanford.smi.protege.util.FrameWithBrowserText

FrameWithBrowserText(Frame, String, Collection<Cls>, String) - Constructor for class edu.stanford.smi.protege.util.FrameWithBrowserText

FrameWithBrowserTextComparator - Class in edu.stanford.smi.protege.util

FrameWithBrowserTextComparator() - Constructor for class edu.stanford.smi.protege.util.FrameWithBrowserTextComparator

FrameWithBrowserTextRenderer - Class in edu.stanford.smi.protege.ui

FrameWithBrowserTextRenderer() - Constructor for class edu.stanford.smi.protege.ui.FrameWithBrowserTextRenderer

FROM - Static variable in interface edu.stanford.smi.protege.model.Model.Slot

FROM - Static variable in interface edu.stanford.smi.protege.model.Model.SlotID

fullSelectionCollapse(JTree) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

fullSelectionExpand(JTree, int) - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

G

gc() - Static method in class edu.stanford.smi.protege.util.SystemUtilities

GeneralPreferencesPanel - Class in edu.stanford.smi.protege.ui

TODO Class Comment

GeneralPreferencesPanel() - Constructor for class edu.stanford.smi.protege.ui.GeneralPreferencesPanel

GeneralWidgetConfigurationPanel - Class in edu.stanford.smi.protege.widget

The "general" panel on the slot widget configuration dialog.

GeneralWidgetConfigurationPanel(SlotWidget) - Constructor for class edu.stanford.smi.protege.widget.GeneralWidgetConfigurationPanel

GENERATE_HTML_OPTIONS_DIALOG_TITLE - Static variable in class edu.stanford.smi.protege.resource.ResourceKey

generateDigestAndSalt(String) - Method in class edu.stanford.smi.protege.widget.DigestedPasswordWidget

generateParseException() - Method in class edu.stanford.smi.protege.storage.clips.Parser

Generate ParseException.

generateUniqueName(String) - Method in class edu.stanford.smi.protege.model.framestore.ImmutableNamesFrameStore

get(KnowledgeBase) - Static method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

A utility hack to get the merging frame store from a kb until I can decide what sort of "real" API access to provide.

get(int) - Method in class edu.stanford.smi.protege.util.HashList

Deprecated. Returns the element at the specified position in this list.

get(Object) - Method in class edu.stanford.smi.protege.util.SuperclassTraverser

get(Object) - Method in class edu.stanford.smi.protege.util.SuperslotTraverser

get(Object) - Method in interface edu.stanford.smi.protege.util.Traverser

getAboutURL() - Static method in class edu.stanford.smi.protege.resource.Text

getAbsoluteDirectory() - Method in class edu.stanford.smi.protege.util.PathSplitter

getAbsolutePath(String) - Static method in class edu.stanford.smi.protege.util.FileUtilities

getAbsolutePath(String, Project) - Static method in class edu.stanford.smi.protege.util.FileUtilities

getAbsoluteURI() - Method in class edu.stanford.smi.protege.util.URIField

getAbstractMode() - Method in class edu.stanford.smi.protege.code.generator.wrapping.ProjectBasedJavaCodeGeneratorOptions

getActiveFrameStore() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

getActiveRootURI() - Method in class edu.stanford.smi.protege.model.Project

getAddAction() - Method in class edu.stanford.smi.protege.widget.ProtegePropertiesComponent

getAddClsesAction() - Method in class edu.stanford.smi.protege.widget.ClsListWidget

getAddClsIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getAddIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getAddInstanceIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getAddInstancesAction() - Method in class edu.stanford.smi.protege.widget.InstanceListWidget

getAddNameOnInstanceForm() - Method in class edu.stanford.smi.protege.model.Project

getAddQueryLibraryIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getAddSlotIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getAddSlotsAction() - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

getAlignBorder() - Static method in class edu.stanford.smi.protege.util.ComponentUtilities

getAllFrameStores() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

getAllHelpURLString() - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getAllKnowledgeBaseFactories() - Method in class edu.stanford.smi.protege.model.Project

getAllowedClses(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAllowedClses() - Method in class edu.stanford.smi.protege.model.DefaultSlot

getAllowedClses(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAllowedClses() - Method in interface edu.stanford.smi.protege.model.Slot

getAllowedClses(Collection) - Static method in class edu.stanford.smi.protege.model.ValueTypeConstraint

getAllowedGroup() - Method in interface edu.stanford.smi.protege.server.metaproject.GroupOperation

getAllowedGroup() - Method in class edu.stanford.smi.protege.server.metaproject.impl.GroupOperationImpl

getAllowedGroupOperations() - Method in class edu.stanford.smi.protege.server.metaproject.impl.PolicyControlledObjectImpl

getAllowedGroupOperations() - Method in interface edu.stanford.smi.protege.server.metaproject.PolicyControlledObject

getAllowedOperations() - Method in class edu.stanford.smi.protege.server.framestore.RemoteClientFrameStore

getAllowedOperations(RemoteSession) - Method in interface edu.stanford.smi.protege.server.framestore.RemoteServerFrameStore

getAllowedOperations(RemoteSession) - Method in class edu.stanford.smi.protege.server.framestore.ServerFrameStore

getAllowedOperations() - Method in interface edu.stanford.smi.protege.server.metaproject.GroupOperation

getAllowedOperations() - Method in class edu.stanford.smi.protege.server.metaproject.impl.GroupOperationImpl

getAllowedOperations(User, ProjectInstance) - Method in class edu.stanford.smi.protege.server.metaproject.impl.PolicyImpl

getAllowedOperations(User, ProjectInstance) - Method in interface edu.stanford.smi.protege.server.metaproject.Policy

getAllowedOperations(RemoteSession, String, String) - Method in interface edu.stanford.smi.protege.server.RemoteServer

getAllowedOperations(RemoteSession, String, String) - Method in class edu.stanford.smi.protege.server.Server

getAllowedParents(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAllowedParents() - Method in class edu.stanford.smi.protege.model.DefaultSlot

getAllowedParents(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAllowedParents() - Method in interface edu.stanford.smi.protege.model.Slot

Returns the classes which restrict the values that this slot can take.

getAllowedParents(Collection) - Static method in class edu.stanford.smi.protege.model.ValueTypeConstraint

getAllowedValues(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAllowedValues() - Method in class edu.stanford.smi.protege.model.DefaultSlot

getAllowedValues(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAllowedValues() - Method in interface edu.stanford.smi.protege.model.Slot

getAllowedValues(Collection) - Static method in class edu.stanford.smi.protege.model.ValueTypeConstraint

getAllowsChildren() - Method in class edu.stanford.smi.protege.util.LazyTreeNode

getAllowsCreateUsers() - Static method in class edu.stanford.smi.protege.server.ServerProperties

getAllowsMultipleValues() - Method in class edu.stanford.smi.protege.model.DefaultFacet

getAllowsMultipleValues(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAllowsMultipleValues() - Method in class edu.stanford.smi.protege.model.DefaultSlot

getAllowsMultipleValues() - Method in interface edu.stanford.smi.protege.model.Facet

getAllowsMultipleValues(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAllowsMultipleValues() - Method in interface edu.stanford.smi.protege.model.Slot

getAllProjectNames() - Method in class edu.stanford.smi.protege.server.Server

getAncestors(Frame) - Method in class edu.stanford.smi.protege.ui.ClsTreeFinder

getAncestors(Frame) - Method in class edu.stanford.smi.protege.ui.FrameTreeFinder

getAncestors(Frame) - Method in class edu.stanford.smi.protege.ui.SlotsTreeFinder

getAndClearValueUpdates() - Method in class edu.stanford.smi.protege.server.framestore.Registration

getAnnotatedInstanceSlot() - Method in class edu.stanford.smi.protege.model.SystemFrames

getAnnotationCls() - Method in class edu.stanford.smi.protege.model.SystemFrames

getAnnotationProject() - Method in class edu.stanford.smi.protege.server.metaproject.impl.ProjectInstanceImpl

getAnnotationProject() - Method in interface edu.stanford.smi.protege.server.metaproject.ProjectInstance

getAnnotationTextSlot() - Method in class edu.stanford.smi.protege.model.SystemFrames

getApplicationDirectory() - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getApplicationOrSystemProperty(String) - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getApplicationOrSystemProperty(String, String) - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getApplicationProperties() - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getApplyTo(String) - Static method in class edu.stanford.smi.protege.model.Transaction

getArchiveManager() - Static method in class edu.stanford.smi.protege.util.ArchiveManager

getArchiveProjectIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getArchiveProjectIcon(boolean, boolean) - Static method in class edu.stanford.smi.protege.resource.Icons

getArchiveRecords(Project) - Method in class edu.stanford.smi.protege.util.ArchiveManager

getArgument() - Method in class edu.stanford.smi.protege.util.AbstractEvent

getArgument1() - Method in class edu.stanford.smi.protege.util.AbstractEvent

getArgument2() - Method in class edu.stanford.smi.protege.util.AbstractEvent

getArgument3() - Method in class edu.stanford.smi.protege.util.AbstractEvent

getAssociatedCls() - Method in class edu.stanford.smi.protege.widget.AbstractClsWidget

getAssociatedCls() - Method in class edu.stanford.smi.protege.widget.AbstractSlotWidget

getAssociatedCls() - Method in interface edu.stanford.smi.protege.widget.ClsWidget

getAssociatedCls() - Method in interface edu.stanford.smi.protege.widget.SlotWidget

getAssociatedFacet(Slot) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAssociatedFacet() - Method in class edu.stanford.smi.protege.model.DefaultSlot

getAssociatedFacet(Slot) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAssociatedFacet() - Method in interface edu.stanford.smi.protege.model.Slot

getAssociatedFacetSlot() - Method in class edu.stanford.smi.protege.model.SystemFrames

getAssociatedSlot() - Method in class edu.stanford.smi.protege.model.DefaultFacet

getAssociatedSlot(Facet) - Method in class edu.stanford.smi.protege.model.DefaultKnowledgeBase

getAssociatedSlot() - Method in interface edu.stanford.smi.protege.model.Facet

getAssociatedSlot(Facet) - Method in interface edu.stanford.smi.protege.model.KnowledgeBase

getAssociatedSlotSlot() - Method in class edu.stanford.smi.protege.model.SystemFrames

getAutoscrollInsets() - Method in class edu.stanford.smi.protege.util.SelectableTree

getAvailableCreateProjectFromFilePluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableCreateProjectPluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableExportPluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableExportProjectPluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableFactories() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableFactoryClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableFrameStores() - Method in class edu.stanford.smi.protege.model.framestore.MergingNarrowFrameStore

getAvailableImportPluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableProjectFixupPluginClasses() - Static method in class edu.stanford.smi.protege.plugin.ProjectFixupsPluginManager

getAvailableProjectFixupPlugins() - Static method in class edu.stanford.smi.protege.plugin.ProjectFixupsPluginManager

getAvailableProjectInfo(RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServer

getAvailableProjectInfo(RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

getAvailableProjectNames(RemoteSession) - Method in interface edu.stanford.smi.protege.server.RemoteServer

getAvailableProjectNames(RemoteSession) - Method in class edu.stanford.smi.protege.server.Server

getAvailableProjectPluginClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableSlotWidgetClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getAvailableTabWidgetClassNames() - Static method in class edu.stanford.smi.protege.plugin.PluginUtilities

getBackgroundColor() - Method in class edu.stanford.smi.protege.util.DefaultRenderer

getBackgroundSelectionColor() - Method in class edu.stanford.smi.protege.util.DefaultRenderer

getBackIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getBandWidthPolicy() - Method in class edu.stanford.smi.protege.server.framestore.Registration

getBaseFile(FileField) - Method in class edu.stanford.smi.protege.model.KnowledgeBaseSourcesEditor

getBaseImplementation(Cls) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

getBaseInterface(Cls) - Method in class edu.stanford.smi.protege.code.generator.wrapping.JavaCodeGenerator

getBaseName(String) - Static method in class edu.stanford.smi.protege.util.FileUtilities

getBaseName(File) - Static method in class edu.stanford.smi.protege.util.FileUtilities

getBaseName(URI) - Static method in class edu.stanford.smi.protege.util.URIUtilities

getBaseSlotMetaCls() - Method in class edu.stanford.smi.protege.widget.TemplateSlotsWidget

getBeginColumn() - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Get token beginning column number.

getBeginLine() - Method in class edu.stanford.smi.protege.storage.clips.SimpleCharStream

Get token beginning line number.

getBeginString() - Method in class edu.stanford.smi.protege.event.TransactionEvent

getBestMatch(List, String) - Method in class edu.stanford.smi.protege.ui.Finder

getBestMatch(List, String) - Method in class edu.stanford.smi.protege.ui.FrameTreeFinder

getBestMatch(List, String) - Method in class edu.stanford.smi.protege.ui.ListFinder

getBitType() - Method in enum edu.stanford.smi.protege.storage.database.KnownDatabase

getBitTypeName() - Method in class edu.stanford.smi.protege.storage.database.RobustConnection

getBlankIcon() - Static method in class edu.stanford.smi.protege.resource.Icons

getBoolean(String) - Method in class edu.stanford.smi.protege.util.PropertyList

getBooleanProperty(String, boolean) - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getBoundName() - Static method in class edu.stanford.smi.protege.server.Server

getBounds() - Method in class edu.stanford.smi.protege.model.WidgetDescriptor

getBrowser() - Static method in class edu.stanford.smi.protege.util.ApplicationProperties

getBrowserSlot() - Method in interface edu.stanford.smi.protege.model.Cls

Deprecated.

getBrowserSlot() - Method in class edu.stanford.smi.protege.model.DefaultCls

Deprecated.

getBrowserSlot(Cls) - Method in class edu.stanford.smi.protege.model.Project

Deprecated.

getBrowserSlot(KnowledgeBase) - Method in class edu.stanford.smi.protege.ui.ClsTreeFinder

getBrowserSlot(KnowledgeBase) - Method in class edu.stanford.smi.protege.ui.FrameTreeFinder