Protege 3.4.8

Deprecated API


Contents
Deprecated Classes
edu.stanford.smi.protege.util.CacheMap
          use the transaction cache utilities. 
edu.stanford.smi.protege.util.HashList
          Use ArrayList instead. 
edu.stanford.smi.protege.util.ListMultiMap
          - use ArrayListMultiMap instead 
 

Deprecated Fields
edu.stanford.smi.protege.model.Model.Slot.DIRECT_ATTACHED_CLASSES
          Use #DIRECT_DOMAIN 
edu.stanford.smi.protege.model.Model.Slot.DIRECT_TYPE
          Use #DIRECT_TYPES 
edu.stanford.smi.protege.model.Model.SlotID.DIRECT_TYPE
          Use #DIRECT_TYPES 
edu.stanford.smi.protege.event.KnowledgeBaseEvent.FRAME_NAME_CHANGED
           
edu.stanford.smi.protege.event.FrameEvent.NAME_CHANGED
           
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.ONTOLOGY_TAB_READ
          - Use constants from MetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.ONTOLOGY_TAB_WRITE
          - Use constants from MetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.MetaProjectConstants.OPERATION_ONTOLOGY_TAB_READ
          - Use constants from OwlMetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.MetaProjectConstants.OPERATION_ONTOLOGY_TAB_WRITE
          - Use constants from OwlMetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.MetaProjectConstants.OPERATION_PROPERTY_TAB_READ
          - Use constants from OwlMetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.MetaProjectConstants.OPERATION_PROPERTY_TAB_WRITE
          - Use constants from OwlMetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.PROPERTY_TAB_READ
          - Use constants from MetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.PROPERTY_TAB_WRITE
          - Use constants from MetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.READ
          - Use constants from MetaProjectConstants 
edu.stanford.smi.protege.server.metaproject.impl.OperationImpl.WRITE
          - Use constants from MetaProjectConstants 
 

Deprecated Methods
edu.stanford.smi.protege.model.DefaultKnowledgeBase.addOwnSlotValue(Frame, Slot, Object)
          use #addDirectOwnSlotValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.addTemplateFacetValue(Cls, Slot, Facet, Object)
          use #setDirectTemplateFacetValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.addTemplateSlotValue(Cls, Slot, Object)
          use #setDirectTemplateSlotValues 
edu.stanford.smi.protege.model.Project.createRuntimeWidget(Instance)
          use createRuntimeClsWidget 
edu.stanford.smi.protege.model.KnowledgeBase.createUniqueFrameName(String)
          pass "null" in as a frame name to a create method to get a gensym name 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.createUniqueFrameName(String)
          no longer needed 
edu.stanford.smi.protege.model.KnowledgeBase.endTransaction()
          Use #commitTransaction() Ends the recently opened transaction and commits the state. 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.endTransaction()
          Use #commitTransaction 
edu.stanford.smi.protege.widget.AbstractWidget.endTransaction()
          Use commitTranscation() or rollbackTransaction() 
edu.stanford.smi.protege.model.KnowledgeBase.endTransaction(boolean)
          Use #commitTransaction or #rollbackTransaction() Ends the recently opened transaction and commits or rollback based on doCommit value 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.endTransaction(boolean)
          Use #commitTransaction or #rollbackTransaction 
edu.stanford.smi.protege.util.Log.enter(Object, String)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.enter(Object, String, Object)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.enter(Object, String, Object, Object)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.enter(Object, String, Object, Object, Object)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.enter(Object, String, Object, Object, Object, Object)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.enter(Object, String, Object, Object, Object, Object, Object)
          Use #getLogger().enter() 
edu.stanford.smi.protege.util.Log.error(String, Object, String)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.error(String, Object, String, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.error(String, Object, String, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.error(String, Object, String, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.error(String, Object, String, Object, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.error(String, Object, String, Object, Object, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String, Object, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exception(Throwable, Object, String, Object, Object, Object, Object, Object)
          Use getLogger().severe(); 
edu.stanford.smi.protege.util.Log.exit(Object, String)
          Use getLogger().exiting(); 
edu.stanford.smi.protege.event.KnowledgeBaseAdapter.frameNameChanged(KnowledgeBaseEvent)
           
edu.stanford.smi.protege.model.DefaultCls.getBrowserSlot()
            
edu.stanford.smi.protege.model.Cls.getBrowserSlot()
            
edu.stanford.smi.protege.model.Project.getBrowserSlot(Cls)
            
edu.stanford.smi.protege.storage.clips.SimpleCharStream.getColumn()
            
edu.stanford.smi.protege.ui.InstanceDisplay.getCurrentClsWidget()
          Use #getCurrentClsWidgets() or #getFirstClsWidget 
edu.stanford.smi.protege.ui.ProjectManager.getCurrentProjectToolBar()
          Use #getCurrentProjectSystemToolBar() 
edu.stanford.smi.protege.model.DefaultFrame.getDefiningProjectURI()
            
edu.stanford.smi.protege.model.DefaultCls.getDirectBrowserSlot()
          Use #getDirectBrowserSlotPattern 
edu.stanford.smi.protege.model.Cls.getDirectBrowserSlot()
            
edu.stanford.smi.protege.model.Project.getDirectBrowserSlot(Cls)
            
edu.stanford.smi.protege.model.Project.getDirectIncludedProjects()
          Use #getDirectIncludedProjectURIs() 
edu.stanford.smi.protege.model.KnowledgeBase.getEventsEnabled()
          Use #getGenerateEventsEnabled(boolean) 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getEventsEnabled()
          Use #getGenerateEventsEnabled(boolean) 
edu.stanford.smi.protege.model.DefaultCls.getInheritedBrowserSlot()
          Use #getInheritedBrowserSlotPattern 
edu.stanford.smi.protege.model.Cls.getInheritedBrowserSlot()
            
edu.stanford.smi.protege.model.Project.getInheritedBrowserSlot(Cls)
          Use Project.getInheritedBrowserSlotPattern(Cls) 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getInstances(Cls)
            
edu.stanford.smi.protege.storage.clips.SimpleCharStream.getLine()
            
edu.stanford.smi.protege.server.Server.getMetaProject()
          In ProtegeJobs use getMetaProjectInstance 
edu.stanford.smi.protege.server.Server.getNameSlot()
          In ProtegeJobs use getMetaProjectInstance 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getNextFrameNumber()
          No longer implemented 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getOwnSlotAndSubslotValues(Frame, Slot)
          use getOwnSlotValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getOwnSlotFacets(Frame, Slot)
          renamed to #getOwnFacets 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getOwnSlotFacetValues(Frame, Slot, Facet)
          renamed to #getOwnFacetValues 
edu.stanford.smi.protege.plugin.PluginUtilities.getPluginsDirectory()
          use class loader instead. 
edu.stanford.smi.protege.server.Server.getProjectCls()
          In ProtegeJobs use getMetaProjectInstance 
edu.stanford.smi.protege.model.Project.getProjectDirectoryFile()
          Use #getProjectDirectoryURI() 
edu.stanford.smi.protege.model.Project.getProjectFile()
          Use #getProjectURI() 
edu.stanford.smi.protege.model.Project.getProjectFilePath()
          Use #getProjectURI() 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getSlotValueLastModificationTimestamp(Frame, Slot, boolean)
          this functionality is no longer available 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getSlotValueLastModifier(Frame, Slot, boolean)
          this functionality is no longer available 
edu.stanford.smi.protege.ui.ProjectView.getTab(String)
          Use #getTabByClassName(String) 
edu.stanford.smi.protege.ui.ProjectView.getTabbedPane()
          returns null. Use the other methods on this class to manipulate views. 
edu.stanford.smi.protege.model.Slot.getTemplateSlotClses()
          Use #getDirectDomain() 
edu.stanford.smi.protege.model.DefaultSlot.getTemplateSlotClses()
            
edu.stanford.smi.protege.model.DefaultKnowledgeBase.getValueChecking()
          Use #getFacetCheckingEnabled 
edu.stanford.smi.protege.model.Frame.isValid()
          Use #isDeleted() 
edu.stanford.smi.protege.model.DefaultFrame.isValid()
            
edu.stanford.smi.protege.event.FrameAdapter.nameChanged(FrameEvent)
          Override frameReplaced instead. 
edu.stanford.smi.protege.ui.DisplayUtilities.pickCls(Component, Collection)
          Use #pickCls(Component, KnowledgeBase, Collection) 
edu.stanford.smi.protege.ui.DisplayUtilities.pickCls(Component, Collection, String)
          Use #pickCls(Component, KnowledgeBase, Collection, String) 
edu.stanford.smi.protege.ui.DisplayUtilities.pickClses(Component, Collection)
          Use #pickClses(Component, KnowledgeBase, Collection) 
edu.stanford.smi.protege.ui.DisplayUtilities.pickConcreteCls(Component, Collection)
          Use #pickConcreteCls(Component, KnowledgeBase kb, Collection) 
edu.stanford.smi.protege.ui.DisplayUtilities.pickConcreteCls(Component, Collection, String)
          Use #pickConcreteCls(Component, KnowledgeBase kb, Collection, String) 
edu.stanford.smi.protege.ui.DisplayUtilities.pickInstances(Component, Collection)
          Use #pickInstance(Component, KnowledgeBase, Collection) 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.removeOwnSlotValue(Frame, Slot, Object)
          use #setDirectOwnSlotValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.removeTemplateFacetOverrides(Cls, Slot)
          renamed to #removeDirectTemplateFacetOverrides 
edu.stanford.smi.protege.ui.InstanceDisplay.reshape(int, int, int, int)
            
edu.stanford.smi.protege.widget.AbstractSlotWidget.reshape(int, int, int, int)
            
edu.stanford.smi.protege.model.KnowledgeBase.setAutoUpdateFacetValues(boolean)
          Use setModificationRecordUpdatingEnabled 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setAutoUpdateFacetValues(boolean)
          Use setModificationRecordUpdatingEnabled 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setDirectBrowserSlot(Cls, Slot)
            
edu.stanford.smi.protege.model.DefaultCls.setDirectBrowserSlot(Slot)
            
edu.stanford.smi.protege.model.KnowledgeBase.setEventsEnabled(boolean)
          Use #setGenerateEventsEnabled(boolean) 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setEventsEnabled(boolean)
          Use #setGenerateEventsEnabled(boolean) 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setNextFrameNumber(int)
          This functionality is no longer available 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setOwnSlotValue(Frame, Slot, Object)
          renamed to #setDirectOwnSlotValue 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setOwnSlotValues(Frame, Slot, Collection)
          renamed to setDirectOwnSlotValues 
edu.stanford.smi.protege.ui.DirectInstancesList.setShowDisplaySlotPanel(boolean)
            
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setTemplateFacetValue(Cls, Slot, Facet, Object)
          renamed to #setDirectTemplateFacetValue 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setTemplateFacetValues(Cls, Slot, Facet, Collection)
          renamed to #setDirectTemplateFacetValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setTemplateSlotValues(Cls, Slot, Collection)
          renamed to #setDirectTemplateSlotValues 
edu.stanford.smi.protege.model.DefaultKnowledgeBase.setValueChecking(boolean)
          Use #setFacetCheckingEnabled(boolean) 
edu.stanford.smi.protege.util.Log.stack(String, Object, String)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.stack(String, Object, String, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.stack(String, Object, String, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.stack(String, Object, String, Object, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.stack(String, Object, String, Object, Object, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String, Object, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String, Object, Object, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.Log.trace(String, Object, String, Object, Object, Object, Object, Object)
          Use getLogger().info(); 
edu.stanford.smi.protege.util.ProjectChooser.useCreateProjectFromFilePlugin(Class, String, String)
          Use: useCreateProjectFromFilePlugin(Class pluginClass, String suffix, String fileName, Collection errors) 
edu.stanford.smi.protege.util.Log.warning(String, Object, String)
          Use getLogger().warning(); 
edu.stanford.smi.protege.util.Log.warning(String, Object, String, Object)
          Use getLogger().warning(); 
edu.stanford.smi.protege.util.Log.warning(String, Object, String, Object, Object)
          Use getLogger().warning(); 
edu.stanford.smi.protege.util.Log.warning(String, Object, String, Object, Object, Object)
          Use getLogger().warning(); 
edu.stanford.smi.protege.util.Log.warning(String, Object, String, Object, Object, Object, Object)
          Use getLogger().warning(); 
 

Deprecated Constructors
edu.stanford.smi.protege.action.DeleteInstancesAction(String, Selectable)
          Use ResourceKey version 
edu.stanford.smi.protege.ui.ReferencersPanel(Project, Instance)
          Use constructor without Project argument 
 


Protege 3.4.8

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